fix syntax

theiagen · Sep 19, 2023 · deb67ef · deb67ef
1 parent 195234a
commit deb67ef
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/tasks/utilities/task_czgenepi_wrangling.wdl b/tasks/utilities/task_czgenepi_wrangling.wdl
@@ -79,7 +79,7 @@ task czgenepi_wrangling {
 
     print("DEBUG: checking if private_id column was set")
     if "~{private_id_column_name}" == "~{terra_table_name}_id":
-      metadata["Private ID"] = metadata["~{private_id_column_name}"]
+      metadata["Private ID"] = metadata.loc[:, "~{private_id_column_name}"]
     else:
       metadata.rename(columns={"~{private_id_column_name}": "Private ID"}, inplace=True)