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update memory to mem as per style guide
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cimendes committed Sep 13, 2023
1 parent 87f9afb commit c204907
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions tasks/quality_control/task_quast.wdl
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ task quast {
Int min_contig_len = 500
String docker = "us-docker.pkg.dev/general-theiagen/staphb/quast:5.0.2"
Int disk_size = 100
Int memory = 2 # added default value
Int mem = 2 # added default value
Int cpu = 2 # added default value
}
command <<<
Expand Down Expand Up @@ -60,7 +60,7 @@ task quast {
}
runtime {
docker: "~{docker}"
memory: "~{memory} GB"
memory: "~{mem} GB"
cpu: "~{cpu}"
disks: "local-disk " + disk_size + " SSD"
disk: disk_size + " GB"
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