Fix lazy expanded postings cache and bug of non equal matcher

CHANGELOG.md

@@ -18,8 +18,10 @@ We use *breaking :warning:* to mark changes that are not backward compatible (re
 - [#7134](https://github.com/thanos-io/thanos/pull/7134) Store, Compact: Revert the recursive block listing mechanism introduced in https://github.com/thanos-io/thanos/pull/6474 and use the same strategy as in 0.31. Introduce a `--block-discovery-strategy` flag to control the listing strategy so that a recursive lister can still be used if the tradeoff of slower but cheaper discovery is preferred.
 - [#7122](https://github.com/thanos-io/thanos/pull/7122) Store Gateway: Fix lazy expanded postings estimate base cardinality using posting group with remove keys.
 - [#7224](https://github.com/thanos-io/thanos/pull/7224) Query-frontend: Add Redis username to the client configuration.
+- [#7220](https://github.com/thanos-io/thanos/pull/7220) Store Gateway: Fix lazy expanded postings caching partial expanded postings and bug of estimating remove postings with non existent value. Added `PromQLSmith` based fuzz test to improve correctness.
 
 ### Added
+
 - [#7194](https://github.com/thanos-io/thanos/pull/7194) Downsample: retry objstore related errors
 - [#7105](https://github.com/thanos-io/thanos/pull/7105) Rule: add flag `--query.enable-x-functions` to allow usage of extended promql functions (xrate, xincrease, xdelta) in loaded rules
 - [#6867](https://github.com/thanos-io/thanos/pull/6867) Query UI: Tenant input box added to the Query UI, in order to be able to specify which tenant the query should use.

go.mod

@@ -61,7 +61,7 @@ require (
 	github.com/prometheus/common v0.46.0
 	github.com/prometheus/exporter-toolkit v0.11.0
 	// Prometheus maps version 2.x.y to tags v0.x.y.
-	github.com/prometheus/prometheus v0.49.2-0.20240126144015-960b6266e2ba
+	github.com/prometheus/prometheus v0.50.0
 	github.com/sony/gobreaker v0.5.0
 	github.com/stretchr/testify v1.8.4
 	github.com/thanos-io/objstore v0.0.0-20240309075357-e8336a5fd5f3
@@ -116,6 +116,7 @@ require (
 )
 
 require (
+	github.com/cortexproject/promqlsmith v0.0.0-20240326071418-c2a9ca1e89f5
 	github.com/mitchellh/go-ps v1.0.0
 	github.com/onsi/gomega v1.27.10
 	github.com/prometheus-community/prom-label-proxy v0.8.1-0.20240127162815-c1195f9aabc0

go.sum

@@ -778,8 +778,8 @@ github.com/coreos/go-systemd/v22 v22.4.0/go.mod h1:Y58oyj3AT4RCenI/lSvhwexgC+NSV
 github.com/coreos/go-systemd/v22 v22.5.0 h1:RrqgGjYQKalulkV8NGVIfkXQf6YYmOyiJKk8iXXhfZs=
 github.com/coreos/go-systemd/v22 v22.5.0/go.mod h1:Y58oyj3AT4RCenI/lSvhwexgC+NSVTIJ3seZv2GcEnc=
 github.com/coreos/pkg v0.0.0-20160727233714-3ac0863d7acf/go.mod h1:E3G3o1h8I7cfcXa63jLwjI0eiQQMgzzUDFVpN/nH/eA=
-github.com/cortexproject/promqlsmith v0.0.0-20240103062231-e3aada49136f h1:0IyHUBbWzCxe/dgjBCQcIv4ZIc7Rvlp2jXVYibcoAW8=
-github.com/cortexproject/promqlsmith v0.0.0-20240103062231-e3aada49136f/go.mod h1:by/B++NlNa8Hp+d2054cy3YR4ijhPNGnuWjUWOUppms=
+github.com/cortexproject/promqlsmith v0.0.0-20240326071418-c2a9ca1e89f5 h1:UfuB6no2X1BcKxICY63lzgY+XaPMQ/Wv4woP3p0L+mg=
+github.com/cortexproject/promqlsmith v0.0.0-20240326071418-c2a9ca1e89f5/go.mod h1:fcysbw4fOsOipXKeXPXWSh7tXrUQSUr5V4duojv0oCM=
 github.com/cpuguy83/go-md2man/v2 v2.0.0-20190314233015-f79a8a8ca69d/go.mod h1:maD7wRr/U5Z6m/iR4s+kqSMx2CaBsrgA7czyZG/E6dU=
 github.com/creack/pty v1.1.7/go.mod h1:lj5s0c3V2DBrqTV7llrYr5NG6My20zk30Fl46Y7DoTY=
 github.com/creack/pty v1.1.9/go.mod h1:oKZEueFk5CKHvIhNR5MUki03XCEU+Q6VDXinZuGJ33E=
@@ -1464,8 +1464,8 @@ github.com/prometheus/procfs v0.7.3/go.mod h1:cz+aTbrPOrUb4q7XlbU9ygM+/jj0fzG6c1
 github.com/prometheus/procfs v0.8.0/go.mod h1:z7EfXMXOkbkqb9IINtpCn86r/to3BnA0uaxHdg830/4=
 github.com/prometheus/procfs v0.12.0 h1:jluTpSng7V9hY0O2R9DzzJHYb2xULk9VTR1V1R/k6Bo=
 github.com/prometheus/procfs v0.12.0/go.mod h1:pcuDEFsWDnvcgNzo4EEweacyhjeA9Zk3cnaOZAZEfOo=
-github.com/prometheus/prometheus v0.49.2-0.20240126144015-960b6266e2ba h1:bDCs3jd+3KURFIDykicCeNfa573KYVZGhN4F62WHTmI=
-github.com/prometheus/prometheus v0.49.2-0.20240126144015-960b6266e2ba/go.mod h1:FvE8dtQ1Ww63IlyKBn1V4s+zMwF9kHkVNkQBR1pM4CU=
+github.com/prometheus/prometheus v0.50.0 h1:gf+SN6jtbsZ70KkIGg7S3LuB4kHyUfatZLCGwZ1/aec=
+github.com/prometheus/prometheus v0.50.0/go.mod h1:FvE8dtQ1Ww63IlyKBn1V4s+zMwF9kHkVNkQBR1pM4CU=
 github.com/rcrowley/go-metrics v0.0.0-20181016184325-3113b8401b8a/go.mod h1:bCqnVzQkZxMG4s8nGwiZ5l3QUCyqpo9Y+/ZMZ9VjZe4=
 github.com/redis/rueidis v1.0.14-go1.18 h1:dGir5z8w8X1ex7JWO/Zx2FMBrZgQ8Yjm+lw9fPLSNGw=
 github.com/redis/rueidis v1.0.14-go1.18/go.mod h1:HGekzV3HbmzFmRK6j0xic8Z9119+ECoGMjeN1TV1NYU=

pkg/store/bucket.go

@@ -1196,13 +1196,10 @@ OUTER:
 		if err := b.ctx.Err(); err != nil {
 			return err
 		}
-		ok, err := b.indexr.LoadSeriesForTime(postingsBatch[i], &b.symbolizedLset, &b.chkMetas, b.skipChunks, b.mint, b.maxt)
+		hasMatchedChunks, err := b.indexr.LoadSeriesForTime(postingsBatch[i], &b.symbolizedLset, &b.chkMetas, b.skipChunks, b.mint, b.maxt)
 		if err != nil {
 			return errors.Wrap(err, "read series")
 		}
-		if !ok {
-			continue
-		}
 
 		if err := b.indexr.LookupLabelsSymbols(b.ctx, b.symbolizedLset, b.b); err != nil {
 			return errors.Wrap(err, "Lookup labels symbols")
@@ -1221,6 +1218,11 @@ OUTER:
 		if b.lazyPostings.lazyExpanded() {
 			b.expandedPostings = append(b.expandedPostings, postingsBatch[i])
 		}
+		// Even though there is no chunks found in the requested time range, we need to continue
+		// for loop after checking lazy posting matchers because of the expanded postings cache.
+		if !hasMatchedChunks {
+			continue
+		}
 
 		completeLabelset := labelpb.ExtendSortedLabels(b.lset, b.extLset)
 		if b.extLsetToRemove != nil {

pkg/store/lazy_postings.go

@@ -54,10 +54,15 @@ func optimizePostingsFetchByDownloadedBytes(r *bucketIndexReader, postingGroups
 			return nil, false, errors.Wrapf(err, "postings offsets for %s", pg.name)
 		}
 
-		// No posting ranges found means empty posting.
-		if len(rngs) == 0 {
+		// If the posting group adds keys, no posting ranges found means empty posting.
+		if len(pg.addKeys) > 0 && len(rngs) == 0 {
 			return nil, true, nil
 		}
+		// If the posting group removes keys, no posting ranges found is fine. It means
+		// that the posting group is a noop. {job != "some_non_existent_value"}
+		if len(pg.removeKeys) > 0 && len(rngs) == 0 {
+			continue
+		}
 		for _, r := range rngs {
 			if r == indexheader.NotFoundRange {
 				continue

pkg/store/lazy_postings_test.go

@@ -308,10 +308,8 @@ func TestOptimizePostingsFetchByDownloadedBytes(t *testing.T) {
 			expectedError:         "postings offsets for foo: random",
 		},
 		{
-			name: "posting offsets empty",
-			inputPostings: map[string]map[string]index.Range{
-				"foo": {"bar": index.Range{End: 8}},
-			},
+			name:             "posting offsets empty with add keys, expect empty posting",
+			inputPostings:    map[string]map[string]index.Range{},
 			seriesMaxSize:    1000,
 			seriesMatchRatio: 0.5,
 			postingGroups: []*postingGroup{
@@ -322,7 +320,7 @@ func TestOptimizePostingsFetchByDownloadedBytes(t *testing.T) {
 			expectedEmptyPosting:  true,
 		},
 		{
-			name: "posting group label doesn't exist",
+			name: "posting group label with add keys doesn't exist, return empty postings",
 			inputPostings: map[string]map[string]index.Range{
 				"foo": {"bar": index.Range{End: 8}},
 			},
@@ -335,6 +333,39 @@ func TestOptimizePostingsFetchByDownloadedBytes(t *testing.T) {
 			expectedPostingGroups: nil,
 			expectedEmptyPosting:  true,
 		},
+		{
+			name: "posting group label with remove keys doesn't exist, noop",
+			inputPostings: map[string]map[string]index.Range{
+				"foo": {"bar": index.Range{End: 8}},
+			},
+			seriesMaxSize:    1000,
+			seriesMatchRatio: 0.5,
+			postingGroups: []*postingGroup{
+				{name: "foo", addKeys: []string{"bar"}},
+				{name: "bar", removeKeys: []string{"foo"}, addAll: true},
+			},
+			expectedPostingGroups: []*postingGroup{
+				{name: "bar", removeKeys: []string{"foo"}, cardinality: 0, addAll: true},
+				{name: "foo", addKeys: []string{"bar"}, cardinality: 1},
+			},
+		},
+		{
+			name: "posting group label with remove keys exist but no matching value, noop",
+			inputPostings: map[string]map[string]index.Range{
+				"foo": {"bar": index.Range{End: 8}},
+				"bar": {"baz": index.Range{Start: 8, End: 16}},
+			},
+			seriesMaxSize:    1000,
+			seriesMatchRatio: 0.5,
+			postingGroups: []*postingGroup{
+				{name: "foo", addKeys: []string{"bar"}},
+				{name: "bar", removeKeys: []string{"foo"}, addAll: true},
+			},
+			expectedPostingGroups: []*postingGroup{
+				{name: "bar", removeKeys: []string{"foo"}, cardinality: 0, addAll: true},
+				{name: "foo", addKeys: []string{"bar"}, cardinality: 1},
+			},
+		},
 		{
 			name: "posting group keys partial exist",
 			inputPostings: map[string]map[string]index.Range{

pkg/testutil/e2eutil/prometheus.go

@@ -811,3 +811,110 @@ func PutOutOfOrderIndex(blockDir string, minTime int64, maxTime int64) error {
 
 	return iw.Close()
 }
+
+// CreateBlockWithChurn writes a block with the given series. Start time of each series
+// will be randomized in the given time window to create churn. Only float chunk is supported right now.
+func CreateBlockWithChurn(
+	ctx context.Context,
+	rnd *rand.Rand,
+	dir string,
+	series []labels.Labels,
+	numSamples int,
+	mint, maxt int64,
+	extLset labels.Labels,
+	resolution int64,
+	scrapeInterval int64,
+	seriesSize int64,
+) (id ulid.ULID, err error) {
+	headOpts := tsdb.DefaultHeadOptions()
+	headOpts.ChunkDirRoot = filepath.Join(dir, "chunks")
+	headOpts.ChunkRange = 10000000000
+	h, err := tsdb.NewHead(nil, nil, nil, nil, headOpts, nil)
+	if err != nil {
+		return id, errors.Wrap(err, "create head block")
+	}
+	defer func() {
+		runutil.CloseWithErrCapture(&err, h, "TSDB Head")
+		if e := os.RemoveAll(headOpts.ChunkDirRoot); e != nil {
+			err = errors.Wrap(e, "delete chunks dir")
+		}
+	}()
+
+	app := h.Appender(ctx)
+	for i := 0; i < len(series); i++ {
+
+		var ref storage.SeriesRef
+		start := RandRange(rnd, mint, maxt)
+		for j := 0; j < numSamples; j++ {
+			if ref == 0 {
+				ref, err = app.Append(0, series[i], start, float64(i+j))
+			} else {
+				ref, err = app.Append(ref, series[i], start, float64(i+j))
+			}
+			if err != nil {
+				if rerr := app.Rollback(); rerr != nil {
+					err = errors.Wrapf(err, "rollback failed: %v", rerr)
+				}
+				return id, errors.Wrap(err, "add sample")
+			}
+			start += scrapeInterval
+			if start > maxt {
+				break
+			}
+		}
+	}
+	if err := app.Commit(); err != nil {
+		return id, errors.Wrap(err, "commit")
+	}
+
+	c, err := tsdb.NewLeveledCompactor(ctx, nil, log.NewNopLogger(), []int64{maxt - mint}, nil, nil)
+	if err != nil {
+		return id, errors.Wrap(err, "create compactor")
+	}
+
+	id, err = c.Write(dir, h, mint, maxt, nil)
+	if err != nil {
+		return id, errors.Wrap(err, "write block")
+	}
+
+	if id.Compare(ulid.ULID{}) == 0 {
+		return id, errors.Errorf("nothing to write, asked for %d samples", numSamples)
+	}
+
+	blockDir := filepath.Join(dir, id.String())
+	logger := log.NewNopLogger()
+
+	if _, err = metadata.InjectThanos(logger, blockDir, metadata.Thanos{
+		Labels:     extLset.Map(),
+		Downsample: metadata.ThanosDownsample{Resolution: resolution},
+		Source:     metadata.TestSource,
+		IndexStats: metadata.IndexStats{SeriesMaxSize: seriesSize},
+	}, nil); err != nil {
+		return id, errors.Wrap(err, "finalize block")
+	}
+
+	return id, nil
+}
+
+// AddDelay rewrites a given block with delay.
+func AddDelay(blockID ulid.ULID, dir string, blockDelay time.Duration) (ulid.ULID, error) {
+	id, err := ulid.New(uint64(timestamp.FromTime(timestamp.Time(int64(blockID.Time())).Add(-blockDelay))), bytes.NewReader(blockID.Entropy()))
+	if err != nil {
+		return ulid.ULID{}, errors.Wrap(err, "create block id")
+	}
+
+	bdir := path.Join(dir, blockID.String())
+	m, err := metadata.ReadFromDir(bdir)
+	if err != nil {
+		return ulid.ULID{}, errors.Wrap(err, "open meta file")
+	}
+
+	logger := log.NewNopLogger()
+	m.ULID = id
+	m.Compaction.Sources = []ulid.ULID{id}
+	if err := m.WriteToDir(logger, path.Join(dir, blockID.String())); err != nil {
+		return ulid.ULID{}, errors.Wrap(err, "write meta.json file")
+	}
+
+	return id, os.Rename(path.Join(dir, blockID.String()), path.Join(dir, id.String()))
+}

pkg/testutil/e2eutil/rand.go

@@ -0,0 +1,11 @@
+// Copyright (c) The Thanos Authors.
+// Licensed under the Apache License 2.0.
+
+package e2eutil
+
+import "math/rand"
+
+// RandRange returns a random int64 from [min, max].
+func RandRange(rnd *rand.Rand, min, max int64) int64 {
+	return rnd.Int63n(max-min) + min
+}