Companion code to the paper "The evolution of RET inhibitor resistance in RET-driven lung and thyroid cancers"
The code and data in this repository can be used to generate the main figures in the manuscript pertaining to WES, MSK-IMPACT, and MSK-ACCESS sequencing data. All code is in R (>=3.5.0).
Additionally, comprehensive clinical and genomic data are available at https://cbioportal.mskcc.org/study/summary?id=mixed_selpercatinib_2020 which is available publicly.