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config.rb:26:in initialize': undefined method map' for "profile:profiles":String (NoMethodError) }.merge(initial_values.map { |k, v| [k.intern, v] }.to_h) Did you mean? tap #38

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11916090 opened this issue Jan 31, 2024 · 1 comment

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@11916090
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Hi,
i set and download kofam_scan-1.3.0 as follow steps:
conda create -n kofamscan
conda activate kofamscan
conda install -c conda-forge ruby
conda install -c bioconda hmmer
conda install -c conda-forge parallel

mkdir KofamKOALA && cd KofamKOALA
wget https://www.genome.jp/ftp/db/kofam/ko_list.gz
wget https://www.genome.jp/ftp/db/kofam/profiles.tar.gz
gunzip ko_list.gz
tar -xzvf profiles.tar.gz

but when i run "exec_annotation -o Dlongan.querryko --cpu 2 --format mapper -E 1e-5 d.pep.fasta " report an error as follws:
config.rb:26:in initialize': undefined method map' for "/path/profiles":String (NoMethodError)
}.merge(initial_values.map { |k, v| [k.intern, v] }.to_h)
^^^^
Did you mean? tap

I have no idea how to slove this problem, can you give me some help, thanks.

wen

@Betula0422
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Hi there, I have encountered the same problem with you. Have you solved the problem?

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