Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Not possible to create many roadrunner instances #1222

Open
matthiaskoenig opened this issue May 17, 2024 · 1 comment
Open

Not possible to create many roadrunner instances #1222

matthiaskoenig opened this issue May 17, 2024 · 1 comment

Comments

@matthiaskoenig
Copy link
Collaborator

When we increase the number of instances the simulation fails with the following.

JIT session error: Cannot allocate memory
Error: Could not find symbol evalInitialConditions
[symbol lookup error] Failed to materialize symbols: { (main, { getPiecewiseTrigger, evalVolatileStoich, setGlobalParameterInitValue, setBoundarySpeciesAmount, evalConversionFactor, getGlobalParameterInitValue, setBoundarySpeciesConcentration, setCompartmentInitVolumes, getEventTrigger, evalRateRuleRates, getCompartmentInitVolumes, getEventPriority, setBoundarySpeciesInitAmounts, getEventDelay, getBoundarySpeciesInitAmounts, eventAssign, eventTrigger, getBoundarySpeciesConcentration, setBoundarySpeciesInitConcentrations, getFloatingSpeciesConcentration, getBoundarySpeciesInitConcentrations, getCompartmentVolume, setFloatingSpeciesInitAmounts, getFloatingSpeciesInitAmounts, getGlobalParameter, setFloatingSpeciesInitConcentrations, setCompartmentVolume, getFloatingSpeciesInitConcentrations, setGlobalParameter, setFloatingSpeciesConcentration, getBoundarySpeciesAmount, evalInitialConditions, evalReactionRates, getFloatingSpeciesAmount, setFloatingSpeciesAmount }) }
Segmentation fault (core dumped)

Nothing to do here. We try to figure out what is going on and provide more information.

@matthiaskoenig
Copy link
Collaborator Author

This is running on machines with 200 GB and 2000GB RAM respectively, so definitely not the physical amount of RAM. But probably related on how much RAM is allocated to the JIT or the JIT object cache or similar things.

@matthiaskoenig matthiaskoenig changed the title Some issue with many roadrunner instances on cluster Not possible to create many roadrunner instances May 21, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant