NeuTu (a.k.a. neuTube)

Software package for neuron reconstruction and visualization

Download

git clone -b public https://github.com/janelia-flyem/NeuTu.git NeuTu

Build

Linux and Mac

1. Make sure you have installed Qt 4.8.1+ (Qt 4.8.4 recommended)

   Various versions of Qt can be dowloaded from https://download.qt.io/archive/qt/

2. Go to the NeuTu directory and run

sh build.sh <qmake_path> <qmake_spec_path>

by specifying the qmake command path and the corresponding spec path. To build a version for the FlyEM project, use the command

sh build.sh <qmake_path> <qmake_spec_path> -e flyem

Windows

See neurolabi/Compile_Windows.txt for more details.

Configuration

The edition for dark field neuron reconstruction

Copy neurolabi/gui/config.xml to the folder containing the executable

The edition for FLyEM

Copy config_flyem.xml and neurolabi/json to the folder containing the executable

Other information

The binary version for dark field neuron reconstruction can be downloaded from

http://www.neutracing.com

Contact Ting Zhao: [email protected] for any questions or comments.