Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

[WIP] Add cmake build scheme #3068

Draft
wants to merge 99 commits into
base: develop
Choose a base branch
from
Draft

[WIP] Add cmake build scheme #3068

wants to merge 99 commits into from

Commits on May 13, 2024

  1. start building out cmake to work with the tests. Now had batched test… 

    … options for unit and prob test folders
    @SteveBronder
    SteveBronder committed May 13, 2024
    Configuration menu
    Copy the full SHA
    67921c3 View commit details
    Browse the repository at this point in the history

Commits on May 14, 2024

  1. update test

    @SteveBronder
    SteveBronder committed May 14, 2024
    Configuration menu
    Copy the full SHA
    56ec5f4 View commit details
    Browse the repository at this point in the history

  2. update cmake

    @SteveBronder
    SteveBronder committed May 14, 2024
    Configuration menu
    Copy the full SHA
    82dcd7a View commit details
    Browse the repository at this point in the history

Commits on May 15, 2024

  1. add inline to a lot of test functions and comment out the dae tests

    @SteveBronder
    SteveBronder committed May 15, 2024
    Configuration menu
    Copy the full SHA
    275ea24 View commit details
    Browse the repository at this point in the history

Commits on May 23, 2024

  1. Merge remote-tracking branch 'origin/develop' into feature/cmake-tests

    @SteveBronder
    SteveBronder committed May 23, 2024
    Configuration menu
    Copy the full SHA
    c2e298e View commit details
    Browse the repository at this point in the history

Commits on May 29, 2024

  1. update

    @SteveBronder
    SteveBronder committed May 29, 2024
    Configuration menu
    Copy the full SHA
    617ee47 View commit details
    Browse the repository at this point in the history

  2. newline error on jenkinsfile

    @SteveBronder
    SteveBronder committed May 29, 2024
    Configuration menu
    Copy the full SHA
    0b95d16 View commit details
    Browse the repository at this point in the history

  3. newline error on jenkinsfile

    @SteveBronder
    SteveBronder committed May 29, 2024
    Configuration menu
    Copy the full SHA
    211839c View commit details
    Browse the repository at this point in the history

  4. Merge commit 'e1fcbe8dca2bfa85b1e109b2bfb1cf65fe0363b7' into HEAD

    @yashikno
    yashikno committed May 29, 2024
    Configuration menu
    Copy the full SHA
    2bda7e4 View commit details
    Browse the repository at this point in the history

  5. [Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1

    @stan-buildbot
    stan-buildbot committed May 29, 2024
    Configuration menu
    Copy the full SHA
    a8efa32 View commit details
    Browse the repository at this point in the history

  6. fix lint issues

    @SteveBronder
    SteveBronder committed May 29, 2024
    Configuration menu
    Copy the full SHA
    238a7fd View commit details
    Browse the repository at this point in the history

  7. update

    @SteveBronder
    SteveBronder committed May 29, 2024
    Configuration menu
    Copy the full SHA
    5dc921b View commit details
    Browse the repository at this point in the history

  8. fix subtest builders

    @SteveBronder
    SteveBronder committed May 29, 2024
    Configuration menu
    Copy the full SHA
    2f7f627 View commit details
    Browse the repository at this point in the history

  9. fix windows compile tests

    @SteveBronder
    SteveBronder committed May 29, 2024
    Configuration menu
    Copy the full SHA
    7ccf07c View commit details
    Browse the repository at this point in the history

  10. move cmake deps to own folder

    @SteveBronder
    SteveBronder committed May 29, 2024
    Configuration menu
    Copy the full SHA
    a844ca4 View commit details
    Browse the repository at this point in the history

  11. revert changes to runtests.py

    @SteveBronder
    SteveBronder committed May 29, 2024
    Configuration menu
    Copy the full SHA
    e97a61e View commit details
    Browse the repository at this point in the history

Commits on May 30, 2024

  1. trying to fix git tests

    @SteveBronder
    SteveBronder committed May 30, 2024
    Configuration menu
    Copy the full SHA
    ce4f814 View commit details
    Browse the repository at this point in the history

Commits on May 31, 2024

  1. update to remove std::cout in dae solver debugging

    @SteveBronder
    SteveBronder committed May 31, 2024
    Configuration menu
    Copy the full SHA
    4d591a7 View commit details
    Browse the repository at this point in the history

  2. [Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1

    @stan-buildbot
    stan-buildbot committed May 31, 2024
    Configuration menu
    Copy the full SHA
    70163a9 View commit details
    Browse the repository at this point in the history

  3. remove && from powershell commands

    @SteveBronder
    SteveBronder committed May 31, 2024
    Configuration menu
    Copy the full SHA
    fff42b0 View commit details
    Browse the repository at this point in the history

Commits on Jun 3, 2024

  1. update workflow

    @SteveBronder
    SteveBronder committed Jun 3, 2024
    Configuration menu
    Copy the full SHA
    33e172e View commit details
    Browse the repository at this point in the history

  2. update tbb

    @SteveBronder
    SteveBronder committed Jun 3, 2024
    Configuration menu
    Copy the full SHA
    026fc47 View commit details
    Browse the repository at this point in the history

  3. update tbb

    @SteveBronder
    SteveBronder committed Jun 3, 2024
    Configuration menu
    Copy the full SHA
    a39fa9d View commit details
    Browse the repository at this point in the history

  4. update tbb

    @SteveBronder
    SteveBronder committed Jun 3, 2024
    Configuration menu
    Copy the full SHA
    b0cf280 View commit details
    Browse the repository at this point in the history

  5. update tbb

    @SteveBronder
    SteveBronder committed Jun 3, 2024
    Configuration menu
    Copy the full SHA
    b4bc673 View commit details
    Browse the repository at this point in the history

  6. update tbb

    @SteveBronder
    SteveBronder committed Jun 3, 2024
    Configuration menu
    Copy the full SHA
    3e921d9 View commit details
    Browse the repository at this point in the history

  7. update tbb

    @SteveBronder
    SteveBronder committed Jun 3, 2024
    Configuration menu
    Copy the full SHA
    6da07ac View commit details
    Browse the repository at this point in the history

  8. update tbb

    @SteveBronder
    SteveBronder committed Jun 3, 2024
    Configuration menu
    Copy the full SHA
    eda1c0b View commit details
    Browse the repository at this point in the history

  9. update tbb

    @SteveBronder
    SteveBronder committed Jun 3, 2024
    Configuration menu
    Copy the full SHA
    4f85d92 View commit details
    Browse the repository at this point in the history

  10. update to use stan::math::pi() instead of M_PI

    @SteveBronder
    SteveBronder committed Jun 3, 2024
    Configuration menu
    Copy the full SHA
    0e39fbf View commit details
    Browse the repository at this point in the history

  11. Merge commit '8a09048f5187662687e04c14d7737cf4d20a18a1' into HEAD

    @yashikno
    yashikno committed Jun 3, 2024
    Configuration menu
    Copy the full SHA
    a397f99 View commit details
    Browse the repository at this point in the history

  12. [Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1

    @stan-buildbot
    stan-buildbot committed Jun 3, 2024
    Configuration menu
    Copy the full SHA
    cd921b2 View commit details
    Browse the repository at this point in the history

  13. fix tbb flags

    @SteveBronder
    SteveBronder committed Jun 3, 2024
    Configuration menu
    Copy the full SHA
    1fbd7e7 View commit details
    Browse the repository at this point in the history

  14. Merge remote-tracking branch 'refs/remotes/origin/feature/cmake-tests… 

    …' into feature/cmake-tests
    @SteveBronder
    SteveBronder committed Jun 3, 2024
    Configuration menu
    Copy the full SHA
    14d0c4e View commit details
    Browse the repository at this point in the history

Commits on Jun 5, 2024

  1. just test making test_unit_math

    @SteveBronder
    SteveBronder committed Jun 5, 2024
    Configuration menu
    Copy the full SHA
    a672ed3 View commit details
    Browse the repository at this point in the history

  2. run all unit tests in jenkinsfile

    @SteveBronder
    SteveBronder committed Jun 5, 2024
    Configuration menu
    Copy the full SHA
    2c20934 View commit details
    Browse the repository at this point in the history

  3. update matrix exp test

    @SteveBronder
    SteveBronder committed Jun 5, 2024
    Configuration menu
    Copy the full SHA
    8b4589c View commit details
    Browse the repository at this point in the history

  4. [Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1

    @stan-buildbot
    stan-buildbot committed Jun 5, 2024
    Configuration menu
    Copy the full SHA
    27b1e26 View commit details
    Browse the repository at this point in the history

  5. update with OpenCL enabled for tests and add .exe to windows ci execu… 

    …table calls
    @SteveBronder
    SteveBronder committed Jun 5, 2024
    Configuration menu
    Copy the full SHA
    8201295 View commit details
    Browse the repository at this point in the history

  6. Merge remote-tracking branch 'refs/remotes/origin/feature/cmake-tests… 

    …' into feature/cmake-tests
    @SteveBronder
    SteveBronder committed Jun 5, 2024
    Configuration menu
    Copy the full SHA
    8bedcae View commit details
    Browse the repository at this point in the history

  7. update linking options to not use generator expression for OpenCL

    @SteveBronder
    SteveBronder committed Jun 5, 2024
    Configuration menu
    Copy the full SHA
    b2816c1 View commit details
    Browse the repository at this point in the history

Commits on Jun 6, 2024

  1. test github action

    @SteveBronder
    SteveBronder committed Jun 6, 2024
    Configuration menu
    Copy the full SHA
    6490b79 View commit details
    Browse the repository at this point in the history

  2. test github action

    @SteveBronder
    SteveBronder committed Jun 6, 2024
    Configuration menu
    Copy the full SHA
    b2be36e View commit details
    Browse the repository at this point in the history

  3. test github action

    @SteveBronder
    SteveBronder committed Jun 6, 2024
    Configuration menu
    Copy the full SHA
    542f636 View commit details
    Browse the repository at this point in the history

Commits on Jun 7, 2024

  1. update

    @SteveBronder
    SteveBronder committed Jun 7, 2024
    Configuration menu
    Copy the full SHA
    58ee686 View commit details
    Browse the repository at this point in the history

  2. update

    @SteveBronder
    SteveBronder committed Jun 7, 2024
    Configuration menu
    Copy the full SHA
    0224042 View commit details
    Browse the repository at this point in the history

  3. update

    @SteveBronder
    SteveBronder committed Jun 7, 2024
    Configuration menu
    Copy the full SHA
    14a78f9 View commit details
    Browse the repository at this point in the history

  4. update

    @SteveBronder
    SteveBronder committed Jun 7, 2024
    Configuration menu
    Copy the full SHA
    a549064 View commit details
    Browse the repository at this point in the history

  5. update

    @SteveBronder
    SteveBronder committed Jun 7, 2024
    Configuration menu
    Copy the full SHA
    d0eae22 View commit details
    Browse the repository at this point in the history

Commits on Jun 8, 2024

  1. update

    @SteveBronder
    SteveBronder committed Jun 8, 2024
    Configuration menu
    Copy the full SHA
    ad86bf0 View commit details
    Browse the repository at this point in the history

  2. update

    @SteveBronder
    SteveBronder committed Jun 8, 2024
    Configuration menu
    Copy the full SHA
    a25224c View commit details
    Browse the repository at this point in the history

  3. update

    @SteveBronder
    SteveBronder committed Jun 8, 2024
    Configuration menu
    Copy the full SHA
    333988f View commit details
    Browse the repository at this point in the history

  4. update

    @SteveBronder
    SteveBronder committed Jun 8, 2024
    Configuration menu
    Copy the full SHA
    1b12e27 View commit details
    Browse the repository at this point in the history

Commits on Jun 10, 2024

  1. use ctest in github actions instead of directly calling test

    @SteveBronder
    SteveBronder committed Jun 10, 2024
    Configuration menu
    Copy the full SHA
    57c1710 View commit details
    Browse the repository at this point in the history

  2. Jenkins uses ctest

    @SteveBronder
    SteveBronder committed Jun 10, 2024
    Configuration menu
    Copy the full SHA
    2ff8d50 View commit details
    Browse the repository at this point in the history

  3. use ctest for opencl

    @SteveBronder
    SteveBronder committed Jun 10, 2024
    Configuration menu
    Copy the full SHA
    63b0ca6 View commit details
    Browse the repository at this point in the history

  4. use ctest for opencl

    @SteveBronder
    SteveBronder committed Jun 10, 2024
    Configuration menu
    Copy the full SHA
    88632fd View commit details
    Browse the repository at this point in the history

  5. allow cmake to compile doxygen

    @SteveBronder
    SteveBronder committed Jun 10, 2024
    Configuration menu
    Copy the full SHA
    cde5c09 View commit details
    Browse the repository at this point in the history

Commits on Jun 11, 2024

  1. update test headers and tag for mix fun tests in windows

    @SteveBronder
    SteveBronder committed Jun 11, 2024
    Configuration menu
    Copy the full SHA
    82f5ab8 View commit details
    Browse the repository at this point in the history

  2. adds inline to gpu util functions

    @SteveBronder
    SteveBronder committed Jun 11, 2024
    Configuration menu
    Copy the full SHA
    4004d23 View commit details
    Browse the repository at this point in the history

  3. [Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1

    @stan-buildbot
    stan-buildbot committed Jun 11, 2024
    Configuration menu
    Copy the full SHA
    10cf4ef View commit details
    Browse the repository at this point in the history

Commits on Jun 12, 2024

  1. add inline to opencl kernel test functions

    @SteveBronder
    SteveBronder committed Jun 12, 2024
    Configuration menu
    Copy the full SHA
    7fcb220 View commit details
    Browse the repository at this point in the history

  2. [Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1

    @stan-buildbot
    stan-buildbot committed Jun 12, 2024
    Configuration menu
    Copy the full SHA
    6e12385 View commit details
    Browse the repository at this point in the history

  3. get mpi tests working locally

    @SteveBronder
    SteveBronder committed Jun 12, 2024
    Configuration menu
    Copy the full SHA
    0f9ff17 View commit details
    Browse the repository at this point in the history

  4. Merge remote-tracking branch 'refs/remotes/origin/feature/cmake-tests… 

    …' into feature/cmake-tests
    @SteveBronder
    SteveBronder committed Jun 12, 2024
    Configuration menu
    Copy the full SHA
    46933ba View commit details
    Browse the repository at this point in the history

  5. [Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1

    @stan-buildbot
    stan-buildbot committed Jun 12, 2024
    Configuration menu
    Copy the full SHA
    59d1265 View commit details
    Browse the repository at this point in the history

  6. update mpi test for cpplint

    @SteveBronder
    SteveBronder committed Jun 12, 2024
    Configuration menu
    Copy the full SHA
    bfc4714 View commit details
    Browse the repository at this point in the history

  7. update mpi test for cpplint

    @SteveBronder
    SteveBronder committed Jun 12, 2024
    Configuration menu
    Copy the full SHA
    b8ea220 View commit details
    Browse the repository at this point in the history

  8. [Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1

    @stan-buildbot
    stan-buildbot committed Jun 12, 2024
    Configuration menu
    Copy the full SHA
    02b0ed6 View commit details
    Browse the repository at this point in the history

  9. update names of tests

    @SteveBronder
    SteveBronder committed Jun 12, 2024
    Configuration menu
    Copy the full SHA
    dd5d1b9 View commit details
    Browse the repository at this point in the history

  10. [Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1

    @stan-buildbot
    stan-buildbot committed Jun 12, 2024
    Configuration menu
    Copy the full SHA
    2813c37 View commit details
    Browse the repository at this point in the history

  11. fix boost download for timestamp

    @SteveBronder
    SteveBronder committed Jun 12, 2024
    Configuration menu
    Copy the full SHA
    163cfae View commit details
    Browse the repository at this point in the history

  12. Merge remote-tracking branch 'refs/remotes/origin/feature/cmake-tests… 

    …' into feature/cmake-tests
    @SteveBronder
    SteveBronder committed Jun 12, 2024
    Configuration menu
    Copy the full SHA
    ddef41c View commit details
    Browse the repository at this point in the history

  13. fix mpi links for cmake

    @SteveBronder
    SteveBronder committed Jun 12, 2024
    Configuration menu
    Copy the full SHA
    c162fdf View commit details
    Browse the repository at this point in the history

Commits on Jun 18, 2024

  1. have opencl use a gtest suite to cleanup the allocator between rev tests

    @SteveBronder
    SteveBronder committed Jun 18, 2024
    Configuration menu
    Copy the full SHA
    0f0b0e5 View commit details
    Browse the repository at this point in the history

  2. Merge remote-tracking branch 'origin/develop' into feature/cmake-tests

    @SteveBronder
    SteveBronder committed Jun 18, 2024
    Configuration menu
    Copy the full SHA
    7ed5c3f View commit details
    Browse the repository at this point in the history

  3. [Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1

    @stan-buildbot
    stan-buildbot committed Jun 18, 2024
    Configuration menu
    Copy the full SHA
    1166b99 View commit details
    Browse the repository at this point in the history

  4. cpplint fixes

    @SteveBronder
    SteveBronder committed Jun 18, 2024
    Configuration menu
    Copy the full SHA
    a5cf6a0 View commit details
    Browse the repository at this point in the history

  5. [Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1

    @stan-buildbot
    stan-buildbot committed Jun 18, 2024
    Configuration menu
    Copy the full SHA
    5c9de1c View commit details
    Browse the repository at this point in the history

  6. cpplint fixes

    @SteveBronder
    SteveBronder committed Jun 18, 2024
    Configuration menu
    Copy the full SHA
    54a3da2 View commit details
    Browse the repository at this point in the history

  7. [Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1

    @stan-buildbot
    stan-buildbot committed Jun 18, 2024
    Configuration menu
    Copy the full SHA
    b53e777 View commit details
    Browse the repository at this point in the history

  8. update jenkinsfile with cc and to report output on ctest error

    @SteveBronder
    SteveBronder committed Jun 18, 2024
    Configuration menu
    Copy the full SHA
    ecbf433 View commit details
    Browse the repository at this point in the history

Commits on Jun 20, 2024

  1. cleanup opencl and comment out device switching test

    @SteveBronder
    SteveBronder committed Jun 20, 2024
    Configuration menu
    Copy the full SHA
    e5f47d3 View commit details
    Browse the repository at this point in the history

  2. Merge remote-tracking branch 'refs/remotes/origin/feature/cmake-tests… 

    …' into feature/cmake-tests
    @SteveBronder
    SteveBronder committed Jun 20, 2024
    Configuration menu
    Copy the full SHA
    06fedf5 View commit details
    Browse the repository at this point in the history

  3. update

    @SteveBronder
    SteveBronder committed Jun 20, 2024
    Configuration menu
    Copy the full SHA
    820c2d7 View commit details
    Browse the repository at this point in the history

  4. [Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1

    @stan-buildbot
    stan-buildbot committed Jun 20, 2024
    Configuration menu
    Copy the full SHA
    5f5dc74 View commit details
    Browse the repository at this point in the history

Commits on Jun 21, 2024

  1. comment out bad opencl test

    @SteveBronder
    SteveBronder committed Jun 21, 2024
    Configuration menu
    Copy the full SHA
    52f6a79 View commit details
    Browse the repository at this point in the history

Commits on Oct 30, 2024

  1. merge to develop

    @SteveBronder
    SteveBronder committed Oct 30, 2024
    Configuration menu
    Copy the full SHA
    f594095 View commit details
    Browse the repository at this point in the history

  2. Update Sundials and fix boost mpi include issue

    @SteveBronder
    SteveBronder committed Oct 30, 2024
    Configuration menu
    Copy the full SHA
    99991b6 View commit details
    Browse the repository at this point in the history

  3. [Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1

    @stan-buildbot
    stan-buildbot committed Oct 30, 2024
    Configuration menu
    Copy the full SHA
    c5ddf3c View commit details
    Browse the repository at this point in the history

Commits on Nov 11, 2024

  1. Try out new jenkins with updated cmake

    @SteveBronder
    SteveBronder committed Nov 11, 2024
    Configuration menu
    Copy the full SHA
    36043c4 View commit details
    Browse the repository at this point in the history

Commits on Nov 21, 2024

  1. update cmake and ctest

    @SteveBronder
    SteveBronder committed Nov 21, 2024
    Configuration menu
    Copy the full SHA
    6a46395 View commit details
    Browse the repository at this point in the history

  2. adds cmake for test headers check

    @SteveBronder
    SteveBronder committed Nov 21, 2024
    Configuration menu
    Copy the full SHA
    8aadf09 View commit details
    Browse the repository at this point in the history

  3. update cmake and ctest

    @SteveBronder
    SteveBronder committed Nov 21, 2024
    Configuration menu
    Copy the full SHA
    2fb39d0 View commit details
    Browse the repository at this point in the history

  4. update cmake and ctest

    @SteveBronder
    SteveBronder committed Nov 21, 2024
    Configuration menu
    Copy the full SHA
    79d7b2a View commit details
    Browse the repository at this point in the history

  5. print user options for cmake at start of run

    @SteveBronder
    SteveBronder committed Nov 21, 2024
    Configuration menu
    Copy the full SHA
    b9b9208 View commit details
    Browse the repository at this point in the history

  6. cleanup ctest regex for labels

    @SteveBronder
    SteveBronder committed Nov 21, 2024
    Configuration menu
    Copy the full SHA
    c05ff0b View commit details
    Browse the repository at this point in the history

Commits on Nov 26, 2024

  1. update pch header to match flags for tests

    @SteveBronder
    SteveBronder committed Nov 26, 2024
    Configuration menu
    Copy the full SHA
    627505a View commit details
    Browse the repository at this point in the history

  2. update pch header to match flags for tests

    @SteveBronder
    SteveBronder committed Nov 26, 2024
    Configuration menu
    Copy the full SHA
    9210a03 View commit details
    Browse the repository at this point in the history