WIP Don't overwrite _COb in PInit #54
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| name: CI | |
| on: [push] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-22.04 | |
| env: | |
| PREFIX: ${{ github.workspace }}/install-prefix | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Install system dependencies | |
| run: > | |
| sudo apt-get update; | |
| sudo apt-get --no-install-recommends install | |
| catch2 | |
| libfreetype6-dev | |
| libglew-dev | |
| libglm-dev | |
| libmsgpack-dev | |
| libnetcdf-dev | |
| libpng-dev | |
| libxml2-dev | |
| python-is-python3 | |
| python3-biopython | |
| python3-dev | |
| python3-numpy | |
| python3-pil | |
| python3-pybind11 | |
| python3-pytest | |
| python3-setuptools | |
| python3-venv | |
| - name: Install collada2gltf | |
| run: | | |
| wget -nv https://anaconda.org/schrodinger/collada2gltf/2.1.4/download/linux-64/collada2gltf-2.1.4-h6bb024c_0.tar.bz2 | |
| sudo tar xf collada2gltf-*.tar.bz2 -C / bin/collada2gltf | |
| - name: Get additional sources | |
| run: | | |
| git clone --depth 1 https://github.com/rcsb/mmtf-cpp.git | |
| cp -R mmtf-cpp/include/mmtf* include/ | |
| - name: Set up venv | |
| run: | | |
| python -m venv --system-site-packages $PREFIX | |
| - name: Build | |
| run: | | |
| $PREFIX/bin/python setup.py --testing install | |
| env: | |
| DEBUG: 1 | |
| - name: Test | |
| working-directory: ./testing | |
| run: | | |
| $PREFIX/bin/python -m pytest |