MRG: add generic support for any type of sketch collection as query or database#430

Merged

ctb merged 111 commits intomainfrom ctb_misc2

Oct 15, 2024

+1,402-442

Commits on Aug 17, 2024

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Commits on Sep 8, 2024

Merge branch 'main' of github.com:sourmash-bio/sourmash_plugin_branchwater into ctb_misc2
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Commits on Sep 9, 2024

MRG: support & test loading of standalone manifests within pathlists (#450 )
ctb
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MRG: documentation updates based on new collection loading (#444 )
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Merge branch 'main' of github.com:sourmash-bio/sourmash_plugin_branchwater into ctb_misc2
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Commits on Sep 11, 2024

cargo fmt
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Commits on Sep 16, 2024

Commits on Sep 17, 2024

update sourmash
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Commits on Sep 18, 2024

mut MultiCollection
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cleanup
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Commits on Sep 21, 2024

update after merge of sourmash-bio/sourmash#3305
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Commits on Sep 22, 2024

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use released version of sourmash
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Commits on Oct 2, 2024

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avoid downsampling until we know there is overlap
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Commits on Oct 6, 2024

Merge branch 'toggle_manysearch_abund' into ctb_misc2
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Commits on Oct 9, 2024

Merge branch 'main' of github.com:sourmash-bio/sourmash_plugin_branchwater into ctb_misc2
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Commits on Oct 11, 2024

update to next sourmash release
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cargo fmt
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upd sourmash
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correct numbers
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Commits on Oct 12, 2024

Commits on Oct 14, 2024

Merge branch 'main' of github.com:sourmash-bio/sourmash_plugin_branchwater into ctb_misc2
ctb
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Commits on Oct 15, 2024

merge
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