initial rename to sourmash_plugin_branchwater

Cargo.toml

@@ -1,11 +1,11 @@
 [package]
-name = "pyo3-branchwater"
+name = "sourmash_plugin_branchwater"
 version = "0.8.3"
 edition = "2021"
 
 # See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html
 [lib]
-name = "pyo3_branchwater"
+name = "pyo3_branchwater" # CTB: should we change this, too?
 crate-type = ["cdylib"]
 
 [dependencies]

README.md

@@ -1,6 +1,6 @@
-# pyo3_branchwater
+# sourmash_plugin_branchwater
 
-[![PyPI](https://img.shields.io/pypi/v/pyo3-branchwater)](https://pypi.org/project/pyo3-branchwater/)
+[![PyPI](https://img.shields.io/pypi/v/sourmash_plugin_branchwater)](https://pypi.org/project/sourmash_plugin_branchwater/)
 
 tl;dr Do fast and low-memory search/gather of many sourmash sketches
 via a sourmash plugin.
@@ -13,7 +13,7 @@ This repo contains a PyO3-based Python wrapper around the
 is a fast, low-memory and multithreaded application for searching very large
 collections of
 [FracMinHash sketches](https://www.biorxiv.org/content/10.1101/2022.01.11.475838v2)
-as generated by [sourmash](sourmash.readthedocs.io/).
+as generated by [sourmash](https://sourmash.readthedocs.io/).
 
 For details, see the Rust code in `src/` and Python wrapper in `src/python/`.
 
@@ -77,10 +77,10 @@ This will make sure everything can be loaded properly.
 The speed and functions of this code will probably be brought into
 sourmash core in the future, most likely as part of
 [sourmash#2230](https://github.com/sourmash-bio/sourmash/pull/2230).
-However, in the meantime, this is a fun side project that makes use
-of sourmash plugins and Rust to provide some fast functionality
-that may be of use to some people, and it can serve as a testbed for
-future sourmash functionality.
+However, in the meantime, this is a fun and useful side project that
+makes use of sourmash plugins and Rust to provide some fast
+functionality, and it can serve as a testbed for future sourmash
+functionality.
 
 ## Developer notes
 

pyproject.toml

@@ -1,6 +1,6 @@
 [project]
-name = "pyo3-branchwater"
-description = "fast search and gather extensions for sourmash"
+name = "sourmash_plugin_branchwater"
+description = "fast command-line extensions for sourmash"
 readme = "README.md"
 requires-python = ">=3.8"
 classifiers = [
@@ -22,13 +22,13 @@ requires = ["maturin>=1.1.0,<2"]
 build-backend = "maturin"
 
 [project.entry-points."sourmash.cli_script"]
-manysearch = "pyo3_branchwater:Branchwater_Manysearch"
-multisearch = "pyo3_branchwater:Branchwater_Multisearch"
-fastgather = "pyo3_branchwater:Branchwater_Fastgather"
-fastmultigather = "pyo3_branchwater:Branchwater_Fastmultigather"
-index = "pyo3_branchwater:Branchwater_Index"
-check = "pyo3_branchwater:Branchwater_Check"
-manysketch = "pyo3_branchwater:Branchwater_Manysketch"
+manysearch = "sourmash_plugin_branchwater:Branchwater_Manysearch"
+multisearch = "sourmash_plugin_branchwater:Branchwater_Multisearch"
+fastgather = "sourmash_plugin_branchwater:Branchwater_Fastgather"
+fastmultigather = "sourmash_plugin_branchwater:Branchwater_Fastmultigather"
+index = "sourmash_plugin_branchwater:Branchwater_Index"
+check = "sourmash_plugin_branchwater:Branchwater_Check"
+manysketch = "sourmash_plugin_branchwater:Branchwater_Manysketch"
 
 
 [tool.maturin]

src/python/tests/__init__.py

@@ -1,2 +1,2 @@
-from pyo3_branchwater import pyo3_branchwater
-pyo3_branchwater.set_global_thread_pool(4)
+from sourmash_plugin_branchwater import sourmash_plugin_branchwater
+sourmash_plugin_branchwater.set_global_thread_pool(4)