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MRG: update code after sourmash fix to Collection::sig_from_record() (
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#514)

* WIP: update code after sourmash fix to `Collection::sig_from_record()`

* fix md5 mismatches

* do not set default scaled in index_siglist

* remove many now-unnecessary downsamples

* remove many downsample_scaled

* eliminate select in load_sketches

* refactor around downsampling

* upd

* fix cargo fmt

* black

* not sure why that test succeeded, actually.

* cargo fmt

* upd to 0.17.2
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ctb authored Nov 15, 2024
1 parent bcd4ebc commit 5a5e71b
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122 changes: 60 additions & 62 deletions Cargo.lock

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2 changes: 1 addition & 1 deletion Cargo.toml
Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@ crate-type = ["cdylib"]
pyo3 = { version = "0.22.6", features = ["extension-module", "anyhow"] }
rayon = "1.10.0"
serde = { version = "1.0.213", features = ["derive"] }
sourmash = { version = "0.17.0", features = ["branchwater"] }
sourmash = { version = "0.17.2", features = ["branchwater"] }
serde_json = "1.0.132"
niffler = "2.4.0"
log = "0.4.22"
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