fix: avoid redundant steps related to shared fs usage (#19)

snakemake · Mar 11, 2024 · a3379bb · a3379bb
1 parent e49c708
commit a3379bb
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diff --git a/pyproject.toml b/pyproject.toml
@@ -16,7 +16,7 @@ keywords = ["snakemake", "plugin", "executor", "cluster", "slurm"]
 [tool.poetry.dependencies]
 python = "^3.11"
 snakemake-interface-common = "^1.13.0"
-snakemake-interface-executor-plugins = "^8.2.0"
+snakemake-interface-executor-plugins = "^9.0.0"
 
 [tool.poetry.group.dev.dependencies]
 black = ">=23.7,<25.0"

diff --git a/snakemake_executor_plugin_slurm_jobstep/__init__.py b/snakemake_executor_plugin_slurm_jobstep/__init__.py
@@ -32,6 +32,7 @@
     pass_default_resources_args=True,
     pass_envvar_declarations_to_cmd=False,
     auto_deploy_default_storage_provider=False,
+    spawned_jobs_assume_shared_fs=True,
 )