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test mocked API

fix: update snakemake-storage-plugin-s3 requirement from 0.2.8 to 0.2.10 #76

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fix: update snakemake-storage-plugin-s3 requirement from 0.2.8 to 0.2.10

fix: update snakemake-storage-plugin-s3 requirement from 0.2.8 to 0.2.10 #76

Workflow file for this run

.github/workflows/ci_mocked_api.yml at dd8d935
name: test mocked API
on:
push:
branches:
- main
pull_request:
env:
PYTHON_VERSION: "3.11"
jobs:
formatting:
runs-on: ubuntu-latest
steps:
- name: Check out the code
uses: actions/checkout@v3
- uses: actions/setup-python@v4
with:
python-version: ${{ env.PYTHON_VERSION }}
- name: Install poetry
run: pip install poetry
- name: Determine dependencies
run: poetry lock
- uses: actions/setup-python@v4
with:
python-version: ${{ env.PYTHON_VERSION }}
cache: poetry
- name: Install Dependencies using Poetry
run: poetry install
- name: Check formatting
run: poetry run black --check .
linting:
runs-on: ubuntu-latest
steps:
- name: Check out the code
uses: actions/checkout@v3
- uses: actions/setup-python@v4
with:
python-version: ${{ env.PYTHON_VERSION }}
- name: Install poetry
run: pip install poetry
- name: Determine dependencies
run: poetry lock
- uses: actions/setup-python@v4
with:
python-version: ${{ env.PYTHON_VERSION }}
cache: poetry
- name: Install Dependencies using Poetry
run: poetry install
- name: Check code
run: poetry run flake8
testing-mocked-api:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- uses: actions/setup-python@v4
with:
python-version: ${{ env.PYTHON_VERSION }}
- name: Install poetry
run: pip install poetry
- name: Determine dependencies
run: poetry lock
- uses: actions/setup-python@v4
with:
python-version: ${{ env.PYTHON_VERSION }}
cache: poetry
- name: Install Dependencies using Poetry
run: poetry install
- name: Run pytest
env:
SNAKEMAKE_AZURE_BATCH_ACCOUNT_URL: "${{ secrets.SNAKEMAKE_AZURE_BATCH_ACCOUNT_URL }}"
SNAKEMAKE_AZURE_BATCH_ACCOUNT_KEY: "${{ secrets.SNAKEMAKE_AZURE_BATCH_ACCOUNT_KEY }}"
run: poetry run coverage run -m pytest tests/tests_mocked_api.py
- name: Run Coverage
run: poetry run coverage report -m