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v1.2.0
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@saketkc saketkc released this 30 Oct 06:23
· 302 commits to master since this release
v1.2.0
8271d41

  • Added additional flags for filtering:

    • --min_valid_codons_ratio (default=0): Minimum ratio of codons with non-zero reads to total codons for
      determining active translation
    • --min_reads_per_codon (default=0): Minimum number of reads per codon for determining active translation
    • --min_read_density (default=0.0): Minimum read density (total_reads/length) over an ORF total codons for determining active translation

  • Added a new command-line argument to learn dataset-specific parameters from Ribo-seq and RNA-seq bams learn-cutoff

  • Travis based CI testing

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