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Automated deployment with updated cache 2024-02-08
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{ | ||
"bed2gff": "/usr/local/bin/bed2gff", | ||
"env-execute": "/usr/local/env-execute" | ||
} |
191 changes: 191 additions & 0 deletions
191
quay.io/biocontainers/h/hmftools-bam-tools:1.2--hdfd78af_0.json
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{ | ||
"aserver": "/usr/local/bin/aserver", | ||
"autopoint": "/usr/local/bin/autopoint", | ||
"bamtools": "/usr/local/bin/bamtools", | ||
"bunzip2": "/usr/local/bin/bunzip2", | ||
"bzcat": "/usr/local/bin/bzcat", | ||
"bzcmp": "/usr/local/bin/bzcmp", | ||
"bzdiff": "/usr/local/bin/bzdiff", | ||
"bzegrep": "/usr/local/bin/bzegrep", | ||
"bzfgrep": "/usr/local/bin/bzfgrep", | ||
"bzgrep": "/usr/local/bin/bzgrep", | ||
"bzip2": "/usr/local/bin/bzip2", | ||
"bzip2recover": "/usr/local/bin/bzip2recover", | ||
"bzless": "/usr/local/bin/bzless", | ||
"bzmore": "/usr/local/bin/bzmore", | ||
"c_rehash": "/usr/local/bin/c_rehash", | ||
"cairo-trace": "/usr/local/bin/cairo-trace", | ||
"captoinfo": "/usr/local/bin/captoinfo", | ||
"cjpeg": "/usr/local/bin/cjpeg", | ||
"clear": "/usr/local/bin/clear", | ||
"compile_et": "/usr/local/bin/compile_et", | ||
"cups-config": "/usr/local/bin/cups-config", | ||
"derb": "/usr/local/bin/derb", | ||
"djpeg": "/usr/local/bin/djpeg", | ||
"envsubst": "/usr/local/bin/envsubst", | ||
"fc-cache": "/usr/local/bin/fc-cache", | ||
"fc-cat": "/usr/local/bin/fc-cat", | ||
"fc-conflist": "/usr/local/bin/fc-conflist", | ||
"fc-list": "/usr/local/bin/fc-list", | ||
"fc-match": "/usr/local/bin/fc-match", | ||
"fc-pattern": "/usr/local/bin/fc-pattern", | ||
"fc-query": "/usr/local/bin/fc-query", | ||
"fc-scan": "/usr/local/bin/fc-scan", | ||
"fc-validate": "/usr/local/bin/fc-validate", | ||
"freetype-config": "/usr/local/bin/freetype-config", | ||
"genbrk": "/usr/local/bin/genbrk", | ||
"gencfu": "/usr/local/bin/gencfu", | ||
"gencnval": "/usr/local/bin/gencnval", | ||
"gendict": "/usr/local/bin/gendict", | ||
"genrb": "/usr/local/bin/genrb", | ||
"gettext": "/usr/local/bin/gettext", | ||
"gettext.sh": "/usr/local/bin/gettext.sh", | ||
"gettextize": "/usr/local/bin/gettextize", | ||
"gif2rgb": "/usr/local/bin/gif2rgb", | ||
"gifbuild": "/usr/local/bin/gifbuild", | ||
"gifclrmp": "/usr/local/bin/gifclrmp", | ||
"giffix": "/usr/local/bin/giffix", | ||
"giftext": "/usr/local/bin/giftext", | ||
"giftool": "/usr/local/bin/giftool", | ||
"gss-client": "/usr/local/bin/gss-client", | ||
"hb-info": "/usr/local/bin/hb-info", | ||
"hb-ot-shape-closure": "/usr/local/bin/hb-ot-shape-closure", | ||
"hb-shape": "/usr/local/bin/hb-shape", | ||
"hb-subset": "/usr/local/bin/hb-subset", | ||
"hb-view": "/usr/local/bin/hb-view", | ||
"icu-config": "/usr/local/bin/icu-config", | ||
"icuexportdata": "/usr/local/bin/icuexportdata", | ||
"icuinfo": "/usr/local/bin/icuinfo", | ||
"infocmp": "/usr/local/bin/infocmp", | ||
"infotocap": "/usr/local/bin/infotocap", | ||
"ippeveprinter": "/usr/local/bin/ippeveprinter", | ||
"ipptool": "/usr/local/bin/ipptool", | ||
"jar": "/usr/local/bin/jar", | ||
"jarsigner": "/usr/local/bin/jarsigner", | ||
"java": "/usr/local/bin/java", | ||
"javac": "/usr/local/bin/javac", | ||
"javadoc": "/usr/local/bin/javadoc", | ||
"javap": "/usr/local/bin/javap", | ||
"jcmd": "/usr/local/bin/jcmd", | ||
"jconsole": "/usr/local/bin/jconsole", | ||
"jdb": "/usr/local/bin/jdb", | ||
"jdeprscan": "/usr/local/bin/jdeprscan", | ||
"jdeps": "/usr/local/bin/jdeps", | ||
"jfr": "/usr/local/bin/jfr", | ||
"jhsdb": "/usr/local/bin/jhsdb", | ||
"jimage": "/usr/local/bin/jimage", | ||
"jinfo": "/usr/local/bin/jinfo", | ||
"jlink": "/usr/local/bin/jlink", | ||
"jmap": "/usr/local/bin/jmap", | ||
"jmod": "/usr/local/bin/jmod", | ||
"jpackage": "/usr/local/bin/jpackage", | ||
"jpegtran": "/usr/local/bin/jpegtran", | ||
"jpgicc": "/usr/local/bin/jpgicc", | ||
"jps": "/usr/local/bin/jps", | ||
"jrunscript": "/usr/local/bin/jrunscript", | ||
"jshell": "/usr/local/bin/jshell", | ||
"jstack": "/usr/local/bin/jstack", | ||
"jstat": "/usr/local/bin/jstat", | ||
"jstatd": "/usr/local/bin/jstatd", | ||
"jwebserver": "/usr/local/bin/jwebserver", | ||
"k5srvutil": "/usr/local/bin/k5srvutil", | ||
"kadmin": "/usr/local/bin/kadmin", | ||
"kdestroy": "/usr/local/bin/kdestroy", | ||
"keyctl": "/usr/local/bin/keyctl", | ||
"keytool": "/usr/local/bin/keytool", | ||
"kinit": "/usr/local/bin/kinit", | ||
"klist": "/usr/local/bin/klist", | ||
"kpasswd": "/usr/local/bin/kpasswd", | ||
"krb5-config": "/usr/local/bin/krb5-config", | ||
"ksu": "/usr/local/bin/ksu", | ||
"kswitch": "/usr/local/bin/kswitch", | ||
"ktutil": "/usr/local/bin/ktutil", | ||
"kvno": "/usr/local/bin/kvno", | ||
"libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip", | ||
"libdeflate-gzip": "/usr/local/bin/libdeflate-gzip", | ||
"libpng-config": "/usr/local/bin/libpng-config", | ||
"libpng16-config": "/usr/local/bin/libpng16-config", | ||
"linkicc": "/usr/local/bin/linkicc", | ||
"lzcat": "/usr/local/bin/lzcat", | ||
"lzcmp": "/usr/local/bin/lzcmp", | ||
"lzdiff": "/usr/local/bin/lzdiff", | ||
"lzegrep": "/usr/local/bin/lzegrep", | ||
"lzfgrep": "/usr/local/bin/lzfgrep", | ||
"lzgrep": "/usr/local/bin/lzgrep", | ||
"lzless": "/usr/local/bin/lzless", | ||
"lzma": "/usr/local/bin/lzma", | ||
"lzmadec": "/usr/local/bin/lzmadec", | ||
"lzmainfo": "/usr/local/bin/lzmainfo", | ||
"lzmore": "/usr/local/bin/lzmore", | ||
"makeconv": "/usr/local/bin/makeconv", | ||
"msgattrib": "/usr/local/bin/msgattrib", | ||
"msgcat": "/usr/local/bin/msgcat", | ||
"msgcmp": "/usr/local/bin/msgcmp", | ||
"msgcomm": "/usr/local/bin/msgcomm", | ||
"msgconv": "/usr/local/bin/msgconv", | ||
"msgen": "/usr/local/bin/msgen", | ||
"msgexec": "/usr/local/bin/msgexec", | ||
"msgfilter": "/usr/local/bin/msgfilter", | ||
"msgfmt": "/usr/local/bin/msgfmt", | ||
"msggrep": "/usr/local/bin/msggrep", | ||
"msginit": "/usr/local/bin/msginit", | ||
"msgmerge": "/usr/local/bin/msgmerge", | ||
"msgunfmt": "/usr/local/bin/msgunfmt", | ||
"msguniq": "/usr/local/bin/msguniq", | ||
"ncurses6-config": "/usr/local/bin/ncurses6-config", | ||
"ncursesw6-config": "/usr/local/bin/ncursesw6-config", | ||
"ngettext": "/usr/local/bin/ngettext", | ||
"openssl": "/usr/local/bin/openssl", | ||
"pcre2-config": "/usr/local/bin/pcre2-config", | ||
"pcre2_jit_test": "/usr/local/bin/pcre2_jit_test", | ||
"pcre2grep": "/usr/local/bin/pcre2grep", | ||
"pcre2posix_test": "/usr/local/bin/pcre2posix_test", | ||
"pcre2test": "/usr/local/bin/pcre2test", | ||
"pkgdata": "/usr/local/bin/pkgdata", | ||
"png-fix-itxt": "/usr/local/bin/png-fix-itxt", | ||
"pngfix": "/usr/local/bin/pngfix", | ||
"psicc": "/usr/local/bin/psicc", | ||
"rdjpgcom": "/usr/local/bin/rdjpgcom", | ||
"recode-sr-latin": "/usr/local/bin/recode-sr-latin", | ||
"reset": "/usr/local/bin/reset", | ||
"rmiregistry": "/usr/local/bin/rmiregistry", | ||
"sclient": "/usr/local/bin/sclient", | ||
"serialver": "/usr/local/bin/serialver", | ||
"sim_client": "/usr/local/bin/sim_client", | ||
"tabs": "/usr/local/bin/tabs", | ||
"tic": "/usr/local/bin/tic", | ||
"tiffcp": "/usr/local/bin/tiffcp", | ||
"tiffdump": "/usr/local/bin/tiffdump", | ||
"tiffinfo": "/usr/local/bin/tiffinfo", | ||
"tiffset": "/usr/local/bin/tiffset", | ||
"tiffsplit": "/usr/local/bin/tiffsplit", | ||
"tificc": "/usr/local/bin/tificc", | ||
"tjbench": "/usr/local/bin/tjbench", | ||
"toe": "/usr/local/bin/toe", | ||
"tput": "/usr/local/bin/tput", | ||
"transicc": "/usr/local/bin/transicc", | ||
"tset": "/usr/local/bin/tset", | ||
"unlzma": "/usr/local/bin/unlzma", | ||
"unxz": "/usr/local/bin/unxz", | ||
"unzstd": "/usr/local/bin/unzstd", | ||
"uuclient": "/usr/local/bin/uuclient", | ||
"wrjpgcom": "/usr/local/bin/wrjpgcom", | ||
"xgettext": "/usr/local/bin/xgettext", | ||
"xmlwf": "/usr/local/bin/xmlwf", | ||
"xz": "/usr/local/bin/xz", | ||
"xzcat": "/usr/local/bin/xzcat", | ||
"xzcmp": "/usr/local/bin/xzcmp", | ||
"xzdec": "/usr/local/bin/xzdec", | ||
"xzdiff": "/usr/local/bin/xzdiff", | ||
"xzegrep": "/usr/local/bin/xzegrep", | ||
"xzfgrep": "/usr/local/bin/xzfgrep", | ||
"xzgrep": "/usr/local/bin/xzgrep", | ||
"xzless": "/usr/local/bin/xzless", | ||
"xzmore": "/usr/local/bin/xzmore", | ||
"zstd": "/usr/local/bin/zstd", | ||
"zstdcat": "/usr/local/bin/zstdcat", | ||
"zstdgrep": "/usr/local/bin/zstdgrep", | ||
"zstdless": "/usr/local/bin/zstdless", | ||
"zstdmt": "/usr/local/bin/zstdmt", | ||
"env-execute": "/usr/local/env-execute" | ||
} |
191 changes: 191 additions & 0 deletions
191
quay.io/biocontainers/h/hmftools-virus-interpreter:1.3--hdfd78af_0.json
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@@ -0,0 +1,191 @@ | ||
{ | ||
"aserver": "/usr/local/bin/aserver", | ||
"autopoint": "/usr/local/bin/autopoint", | ||
"bunzip2": "/usr/local/bin/bunzip2", | ||
"bzcat": "/usr/local/bin/bzcat", | ||
"bzcmp": "/usr/local/bin/bzcmp", | ||
"bzdiff": "/usr/local/bin/bzdiff", | ||
"bzegrep": "/usr/local/bin/bzegrep", | ||
"bzfgrep": "/usr/local/bin/bzfgrep", | ||
"bzgrep": "/usr/local/bin/bzgrep", | ||
"bzip2": "/usr/local/bin/bzip2", | ||
"bzip2recover": "/usr/local/bin/bzip2recover", | ||
"bzless": "/usr/local/bin/bzless", | ||
"bzmore": "/usr/local/bin/bzmore", | ||
"c_rehash": "/usr/local/bin/c_rehash", | ||
"cairo-trace": "/usr/local/bin/cairo-trace", | ||
"captoinfo": "/usr/local/bin/captoinfo", | ||
"cjpeg": "/usr/local/bin/cjpeg", | ||
"clear": "/usr/local/bin/clear", | ||
"compile_et": "/usr/local/bin/compile_et", | ||
"cups-config": "/usr/local/bin/cups-config", | ||
"derb": "/usr/local/bin/derb", | ||
"djpeg": "/usr/local/bin/djpeg", | ||
"envsubst": "/usr/local/bin/envsubst", | ||
"fc-cache": "/usr/local/bin/fc-cache", | ||
"fc-cat": "/usr/local/bin/fc-cat", | ||
"fc-conflist": "/usr/local/bin/fc-conflist", | ||
"fc-list": "/usr/local/bin/fc-list", | ||
"fc-match": "/usr/local/bin/fc-match", | ||
"fc-pattern": "/usr/local/bin/fc-pattern", | ||
"fc-query": "/usr/local/bin/fc-query", | ||
"fc-scan": "/usr/local/bin/fc-scan", | ||
"fc-validate": "/usr/local/bin/fc-validate", | ||
"freetype-config": "/usr/local/bin/freetype-config", | ||
"genbrk": "/usr/local/bin/genbrk", | ||
"gencfu": "/usr/local/bin/gencfu", | ||
"gencnval": "/usr/local/bin/gencnval", | ||
"gendict": "/usr/local/bin/gendict", | ||
"genrb": "/usr/local/bin/genrb", | ||
"gettext": "/usr/local/bin/gettext", | ||
"gettext.sh": "/usr/local/bin/gettext.sh", | ||
"gettextize": "/usr/local/bin/gettextize", | ||
"gif2rgb": "/usr/local/bin/gif2rgb", | ||
"gifbuild": "/usr/local/bin/gifbuild", | ||
"gifclrmp": "/usr/local/bin/gifclrmp", | ||
"giffix": "/usr/local/bin/giffix", | ||
"giftext": "/usr/local/bin/giftext", | ||
"giftool": "/usr/local/bin/giftool", | ||
"gss-client": "/usr/local/bin/gss-client", | ||
"hb-info": "/usr/local/bin/hb-info", | ||
"hb-ot-shape-closure": "/usr/local/bin/hb-ot-shape-closure", | ||
"hb-shape": "/usr/local/bin/hb-shape", | ||
"hb-subset": "/usr/local/bin/hb-subset", | ||
"hb-view": "/usr/local/bin/hb-view", | ||
"icu-config": "/usr/local/bin/icu-config", | ||
"icuexportdata": "/usr/local/bin/icuexportdata", | ||
"icuinfo": "/usr/local/bin/icuinfo", | ||
"infocmp": "/usr/local/bin/infocmp", | ||
"infotocap": "/usr/local/bin/infotocap", | ||
"ippeveprinter": "/usr/local/bin/ippeveprinter", | ||
"ipptool": "/usr/local/bin/ipptool", | ||
"jar": "/usr/local/bin/jar", | ||
"jarsigner": "/usr/local/bin/jarsigner", | ||
"java": "/usr/local/bin/java", | ||
"javac": "/usr/local/bin/javac", | ||
"javadoc": "/usr/local/bin/javadoc", | ||
"javap": "/usr/local/bin/javap", | ||
"jcmd": "/usr/local/bin/jcmd", | ||
"jconsole": "/usr/local/bin/jconsole", | ||
"jdb": "/usr/local/bin/jdb", | ||
"jdeprscan": "/usr/local/bin/jdeprscan", | ||
"jdeps": "/usr/local/bin/jdeps", | ||
"jfr": "/usr/local/bin/jfr", | ||
"jhsdb": "/usr/local/bin/jhsdb", | ||
"jimage": "/usr/local/bin/jimage", | ||
"jinfo": "/usr/local/bin/jinfo", | ||
"jlink": "/usr/local/bin/jlink", | ||
"jmap": "/usr/local/bin/jmap", | ||
"jmod": "/usr/local/bin/jmod", | ||
"jpackage": "/usr/local/bin/jpackage", | ||
"jpegtran": "/usr/local/bin/jpegtran", | ||
"jpgicc": "/usr/local/bin/jpgicc", | ||
"jps": "/usr/local/bin/jps", | ||
"jrunscript": "/usr/local/bin/jrunscript", | ||
"jshell": "/usr/local/bin/jshell", | ||
"jstack": "/usr/local/bin/jstack", | ||
"jstat": "/usr/local/bin/jstat", | ||
"jstatd": "/usr/local/bin/jstatd", | ||
"jwebserver": "/usr/local/bin/jwebserver", | ||
"k5srvutil": "/usr/local/bin/k5srvutil", | ||
"kadmin": "/usr/local/bin/kadmin", | ||
"kdestroy": "/usr/local/bin/kdestroy", | ||
"keyctl": "/usr/local/bin/keyctl", | ||
"keytool": "/usr/local/bin/keytool", | ||
"kinit": "/usr/local/bin/kinit", | ||
"klist": "/usr/local/bin/klist", | ||
"kpasswd": "/usr/local/bin/kpasswd", | ||
"krb5-config": "/usr/local/bin/krb5-config", | ||
"ksu": "/usr/local/bin/ksu", | ||
"kswitch": "/usr/local/bin/kswitch", | ||
"ktutil": "/usr/local/bin/ktutil", | ||
"kvno": "/usr/local/bin/kvno", | ||
"libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip", | ||
"libdeflate-gzip": "/usr/local/bin/libdeflate-gzip", | ||
"libpng-config": "/usr/local/bin/libpng-config", | ||
"libpng16-config": "/usr/local/bin/libpng16-config", | ||
"linkicc": "/usr/local/bin/linkicc", | ||
"lzcat": "/usr/local/bin/lzcat", | ||
"lzcmp": "/usr/local/bin/lzcmp", | ||
"lzdiff": "/usr/local/bin/lzdiff", | ||
"lzegrep": "/usr/local/bin/lzegrep", | ||
"lzfgrep": "/usr/local/bin/lzfgrep", | ||
"lzgrep": "/usr/local/bin/lzgrep", | ||
"lzless": "/usr/local/bin/lzless", | ||
"lzma": "/usr/local/bin/lzma", | ||
"lzmadec": "/usr/local/bin/lzmadec", | ||
"lzmainfo": "/usr/local/bin/lzmainfo", | ||
"lzmore": "/usr/local/bin/lzmore", | ||
"makeconv": "/usr/local/bin/makeconv", | ||
"msgattrib": "/usr/local/bin/msgattrib", | ||
"msgcat": "/usr/local/bin/msgcat", | ||
"msgcmp": "/usr/local/bin/msgcmp", | ||
"msgcomm": "/usr/local/bin/msgcomm", | ||
"msgconv": "/usr/local/bin/msgconv", | ||
"msgen": "/usr/local/bin/msgen", | ||
"msgexec": "/usr/local/bin/msgexec", | ||
"msgfilter": "/usr/local/bin/msgfilter", | ||
"msgfmt": "/usr/local/bin/msgfmt", | ||
"msggrep": "/usr/local/bin/msggrep", | ||
"msginit": "/usr/local/bin/msginit", | ||
"msgmerge": "/usr/local/bin/msgmerge", | ||
"msgunfmt": "/usr/local/bin/msgunfmt", | ||
"msguniq": "/usr/local/bin/msguniq", | ||
"ncurses6-config": "/usr/local/bin/ncurses6-config", | ||
"ncursesw6-config": "/usr/local/bin/ncursesw6-config", | ||
"ngettext": "/usr/local/bin/ngettext", | ||
"openssl": "/usr/local/bin/openssl", | ||
"pcre2-config": "/usr/local/bin/pcre2-config", | ||
"pcre2_jit_test": "/usr/local/bin/pcre2_jit_test", | ||
"pcre2grep": "/usr/local/bin/pcre2grep", | ||
"pcre2posix_test": "/usr/local/bin/pcre2posix_test", | ||
"pcre2test": "/usr/local/bin/pcre2test", | ||
"pkgdata": "/usr/local/bin/pkgdata", | ||
"png-fix-itxt": "/usr/local/bin/png-fix-itxt", | ||
"pngfix": "/usr/local/bin/pngfix", | ||
"psicc": "/usr/local/bin/psicc", | ||
"rdjpgcom": "/usr/local/bin/rdjpgcom", | ||
"recode-sr-latin": "/usr/local/bin/recode-sr-latin", | ||
"reset": "/usr/local/bin/reset", | ||
"rmiregistry": "/usr/local/bin/rmiregistry", | ||
"sclient": "/usr/local/bin/sclient", | ||
"serialver": "/usr/local/bin/serialver", | ||
"sim_client": "/usr/local/bin/sim_client", | ||
"tabs": "/usr/local/bin/tabs", | ||
"tic": "/usr/local/bin/tic", | ||
"tiffcp": "/usr/local/bin/tiffcp", | ||
"tiffdump": "/usr/local/bin/tiffdump", | ||
"tiffinfo": "/usr/local/bin/tiffinfo", | ||
"tiffset": "/usr/local/bin/tiffset", | ||
"tiffsplit": "/usr/local/bin/tiffsplit", | ||
"tificc": "/usr/local/bin/tificc", | ||
"tjbench": "/usr/local/bin/tjbench", | ||
"toe": "/usr/local/bin/toe", | ||
"tput": "/usr/local/bin/tput", | ||
"transicc": "/usr/local/bin/transicc", | ||
"tset": "/usr/local/bin/tset", | ||
"unlzma": "/usr/local/bin/unlzma", | ||
"unxz": "/usr/local/bin/unxz", | ||
"unzstd": "/usr/local/bin/unzstd", | ||
"uuclient": "/usr/local/bin/uuclient", | ||
"virusinterpreter": "/usr/local/bin/virusinterpreter", | ||
"wrjpgcom": "/usr/local/bin/wrjpgcom", | ||
"xgettext": "/usr/local/bin/xgettext", | ||
"xmlwf": "/usr/local/bin/xmlwf", | ||
"xz": "/usr/local/bin/xz", | ||
"xzcat": "/usr/local/bin/xzcat", | ||
"xzcmp": "/usr/local/bin/xzcmp", | ||
"xzdec": "/usr/local/bin/xzdec", | ||
"xzdiff": "/usr/local/bin/xzdiff", | ||
"xzegrep": "/usr/local/bin/xzegrep", | ||
"xzfgrep": "/usr/local/bin/xzfgrep", | ||
"xzgrep": "/usr/local/bin/xzgrep", | ||
"xzless": "/usr/local/bin/xzless", | ||
"xzmore": "/usr/local/bin/xzmore", | ||
"zstd": "/usr/local/bin/zstd", | ||
"zstdcat": "/usr/local/bin/zstdcat", | ||
"zstdgrep": "/usr/local/bin/zstdgrep", | ||
"zstdless": "/usr/local/bin/zstdless", | ||
"zstdmt": "/usr/local/bin/zstdmt", | ||
"env-execute": "/usr/local/env-execute" | ||
} |
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