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Automated deployment with updated cache 2024-05-27
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|---|---|---|
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| { | ||
| "colorid_bv": "/usr/local/bin/colorid_bv", | ||
| "env-execute": "/usr/local/env-execute" | ||
| } |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
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| { | ||
| "get_orfs": "/usr/local/bin/get_orfs", | ||
| "env-execute": "/usr/local/env-execute" | ||
| } |
151 changes: 151 additions & 0 deletions
151
quay.io/biocontainers/h/handyreadgenotyper:0.1.13--pyhdfd78af_0.json
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,151 @@ | ||
| { | ||
| "2to3": "/usr/local/bin/2to3", | ||
| "2to3-3.8": "/usr/local/bin/2to3-3.8", | ||
| "ace2sam": "/usr/local/bin/ace2sam", | ||
| "adig": "/usr/local/bin/adig", | ||
| "ahost": "/usr/local/bin/ahost", | ||
| "annot-tsv": "/usr/local/bin/annot-tsv", | ||
| "bgzip": "/usr/local/bin/bgzip", | ||
| "blast2sam.pl": "/usr/local/bin/blast2sam.pl", | ||
| "bowtie2sam.pl": "/usr/local/bin/bowtie2sam.pl", | ||
| "bunzip2": "/usr/local/bin/bunzip2", | ||
| "bzcat": "/usr/local/bin/bzcat", | ||
| "bzcmp": "/usr/local/bin/bzcmp", | ||
| "bzdiff": "/usr/local/bin/bzdiff", | ||
| "bzegrep": "/usr/local/bin/bzegrep", | ||
| "bzfgrep": "/usr/local/bin/bzfgrep", | ||
| "bzgrep": "/usr/local/bin/bzgrep", | ||
| "bzip2": "/usr/local/bin/bzip2", | ||
| "bzip2recover": "/usr/local/bin/bzip2recover", | ||
| "bzless": "/usr/local/bin/bzless", | ||
| "bzmore": "/usr/local/bin/bzmore", | ||
| "c_rehash": "/usr/local/bin/c_rehash", | ||
| "captoinfo": "/usr/local/bin/captoinfo", | ||
| "classifier_report.py": "/usr/local/bin/classifier_report.py", | ||
| "classify": "/usr/local/bin/classify", | ||
| "classify.py": "/usr/local/bin/classify.py", | ||
| "clear": "/usr/local/bin/clear", | ||
| "compile_et": "/usr/local/bin/compile_et", | ||
| "curl-config": "/usr/local/bin/curl-config", | ||
| "data_classes.py": "/usr/local/bin/data_classes.py", | ||
| "export2sam.pl": "/usr/local/bin/export2sam.pl", | ||
| "f2py": "/usr/local/bin/f2py", | ||
| "f2py3": "/usr/local/bin/f2py3", | ||
| "f2py3.8": "/usr/local/bin/f2py3.8", | ||
| "fasta-sanitize.pl": "/usr/local/bin/fasta-sanitize.pl", | ||
| "genotyper_data_classes.py": "/usr/local/bin/genotyper_data_classes.py", | ||
| "gss-client": "/usr/local/bin/gss-client", | ||
| "htsfile": "/usr/local/bin/htsfile", | ||
| "idle3": "/usr/local/bin/idle3", | ||
| "idle3.8": "/usr/local/bin/idle3.8", | ||
| "infocmp": "/usr/local/bin/infocmp", | ||
| "infotocap": "/usr/local/bin/infotocap", | ||
| "input_processing.py": "/usr/local/bin/input_processing.py", | ||
| "inputs_validation.py": "/usr/local/bin/inputs_validation.py", | ||
| "interpolate_sam.pl": "/usr/local/bin/interpolate_sam.pl", | ||
| "k5srvutil": "/usr/local/bin/k5srvutil", | ||
| "k8": "/usr/local/bin/k8", | ||
| "kadmin": "/usr/local/bin/kadmin", | ||
| "kdestroy": "/usr/local/bin/kdestroy", | ||
| "keyctl": "/usr/local/bin/keyctl", | ||
| "kinit": "/usr/local/bin/kinit", | ||
| "klist": "/usr/local/bin/klist", | ||
| "kpasswd": "/usr/local/bin/kpasswd", | ||
| "krb5-config": "/usr/local/bin/krb5-config", | ||
| "ksu": "/usr/local/bin/ksu", | ||
| "kswitch": "/usr/local/bin/kswitch", | ||
| "ktutil": "/usr/local/bin/ktutil", | ||
| "kvno": "/usr/local/bin/kvno", | ||
| "libdeflate-gunzip": "/usr/local/bin/libdeflate-gunzip", | ||
| "libdeflate-gzip": "/usr/local/bin/libdeflate-gzip", | ||
| "lzcat": "/usr/local/bin/lzcat", | ||
| "lzcmp": "/usr/local/bin/lzcmp", | ||
| "lzdiff": "/usr/local/bin/lzdiff", | ||
| "lzegrep": "/usr/local/bin/lzegrep", | ||
| "lzfgrep": "/usr/local/bin/lzfgrep", | ||
| "lzgrep": "/usr/local/bin/lzgrep", | ||
| "lzless": "/usr/local/bin/lzless", | ||
| "lzma": "/usr/local/bin/lzma", | ||
| "lzmadec": "/usr/local/bin/lzmadec", | ||
| "lzmainfo": "/usr/local/bin/lzmainfo", | ||
| "lzmore": "/usr/local/bin/lzmore", | ||
| "map.py": "/usr/local/bin/map.py", | ||
| "maq2sam-long": "/usr/local/bin/maq2sam-long", | ||
| "maq2sam-short": "/usr/local/bin/maq2sam-short", | ||
| "md5fa": "/usr/local/bin/md5fa", | ||
| "md5sum-lite": "/usr/local/bin/md5sum-lite", | ||
| "minimap2": "/usr/local/bin/minimap2", | ||
| "model_manager.py": "/usr/local/bin/model_manager.py", | ||
| "ncurses6-config": "/usr/local/bin/ncurses6-config", | ||
| "ncursesw6-config": "/usr/local/bin/ncursesw6-config", | ||
| "nghttp": "/usr/local/bin/nghttp", | ||
| "nghttpd": "/usr/local/bin/nghttpd", | ||
| "nghttpx": "/usr/local/bin/nghttpx", | ||
| "normalizer": "/usr/local/bin/normalizer", | ||
| "novo2sam.pl": "/usr/local/bin/novo2sam.pl", | ||
| "openssl": "/usr/local/bin/openssl", | ||
| "paftools.js": "/usr/local/bin/paftools.js", | ||
| "pip": "/usr/local/bin/pip", | ||
| "pip3": "/usr/local/bin/pip3", | ||
| "plot-ampliconstats": "/usr/local/bin/plot-ampliconstats", | ||
| "plot-bamstats": "/usr/local/bin/plot-bamstats", | ||
| "psl2sam.pl": "/usr/local/bin/psl2sam.pl", | ||
| "pydoc": "/usr/local/bin/pydoc", | ||
| "pydoc3": "/usr/local/bin/pydoc3", | ||
| "pydoc3.8": "/usr/local/bin/pydoc3.8", | ||
| "python": "/usr/local/bin/python", | ||
| "python3": "/usr/local/bin/python3", | ||
| "python3-config": "/usr/local/bin/python3-config", | ||
| "python3.8": "/usr/local/bin/python3.8", | ||
| "python3.8-config": "/usr/local/bin/python3.8-config", | ||
| "read_classifier.py": "/usr/local/bin/read_classifier.py", | ||
| "reset": "/usr/local/bin/reset", | ||
| "sam2vcf.pl": "/usr/local/bin/sam2vcf.pl", | ||
| "samtools": "/usr/local/bin/samtools", | ||
| "samtools.pl": "/usr/local/bin/samtools.pl", | ||
| "sclient": "/usr/local/bin/sclient", | ||
| "sdust": "/usr/local/bin/sdust", | ||
| "seq_cache_populate.pl": "/usr/local/bin/seq_cache_populate.pl", | ||
| "sim_client": "/usr/local/bin/sim_client", | ||
| "soap2sam.pl": "/usr/local/bin/soap2sam.pl", | ||
| "sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer", | ||
| "tabix": "/usr/local/bin/tabix", | ||
| "tabs": "/usr/local/bin/tabs", | ||
| "tclsh": "/usr/local/bin/tclsh", | ||
| "tclsh8.6": "/usr/local/bin/tclsh8.6", | ||
| "tic": "/usr/local/bin/tic", | ||
| "toe": "/usr/local/bin/toe", | ||
| "tput": "/usr/local/bin/tput", | ||
| "tqdm": "/usr/local/bin/tqdm", | ||
| "train": "/usr/local/bin/train", | ||
| "train.py": "/usr/local/bin/train.py", | ||
| "tset": "/usr/local/bin/tset", | ||
| "unlzma": "/usr/local/bin/unlzma", | ||
| "unxz": "/usr/local/bin/unxz", | ||
| "unzstd": "/usr/local/bin/unzstd", | ||
| "uuclient": "/usr/local/bin/uuclient", | ||
| "wgsim": "/usr/local/bin/wgsim", | ||
| "wgsim_eval.pl": "/usr/local/bin/wgsim_eval.pl", | ||
| "wheel": "/usr/local/bin/wheel", | ||
| "wish": "/usr/local/bin/wish", | ||
| "wish8.6": "/usr/local/bin/wish8.6", | ||
| "x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld", | ||
| "x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld", | ||
| "xz": "/usr/local/bin/xz", | ||
| "xzcat": "/usr/local/bin/xzcat", | ||
| "xzcmp": "/usr/local/bin/xzcmp", | ||
| "xzdec": "/usr/local/bin/xzdec", | ||
| "xzdiff": "/usr/local/bin/xzdiff", | ||
| "xzegrep": "/usr/local/bin/xzegrep", | ||
| "xzfgrep": "/usr/local/bin/xzfgrep", | ||
| "xzgrep": "/usr/local/bin/xzgrep", | ||
| "xzless": "/usr/local/bin/xzless", | ||
| "xzmore": "/usr/local/bin/xzmore", | ||
| "zoom2sam.pl": "/usr/local/bin/zoom2sam.pl", | ||
| "zstd": "/usr/local/bin/zstd", | ||
| "zstdcat": "/usr/local/bin/zstdcat", | ||
| "zstdgrep": "/usr/local/bin/zstdgrep", | ||
| "zstdless": "/usr/local/bin/zstdless", | ||
| "zstdmt": "/usr/local/bin/zstdmt", | ||
| "env-execute": "/usr/local/env-execute" | ||
| } |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
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| { | ||
| "mgikit": "/usr/local/bin/mgikit", | ||
| "env-execute": "/usr/local/env-execute" | ||
| } |
130 changes: 130 additions & 0 deletions
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quay.io/biocontainers/m/mmseqs2-server:8.c4b9644--he881be0_0.json
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,130 @@ | ||
| { | ||
| "adig": "/usr/local/bin/adig", | ||
| "ahost": "/usr/local/bin/ahost", | ||
| "aria2c": "/usr/local/bin/aria2c", | ||
| "autopoint": "/usr/local/bin/autopoint", | ||
| "awk": "/usr/local/bin/awk", | ||
| "bunzip2": "/usr/local/bin/bunzip2", | ||
| "bzcat": "/usr/local/bin/bzcat", | ||
| "bzcmp": "/usr/local/bin/bzcmp", | ||
| "bzdiff": "/usr/local/bin/bzdiff", | ||
| "bzegrep": "/usr/local/bin/bzegrep", | ||
| "bzfgrep": "/usr/local/bin/bzfgrep", | ||
| "bzgrep": "/usr/local/bin/bzgrep", | ||
| "bzip2": "/usr/local/bin/bzip2", | ||
| "bzip2recover": "/usr/local/bin/bzip2recover", | ||
| "bzless": "/usr/local/bin/bzless", | ||
| "bzmore": "/usr/local/bin/bzmore", | ||
| "c_rehash": "/usr/local/bin/c_rehash", | ||
| "captoinfo": "/usr/local/bin/captoinfo", | ||
| "clear": "/usr/local/bin/clear", | ||
| "corelist": "/usr/local/bin/corelist", | ||
| "cpan": "/usr/local/bin/cpan", | ||
| "derb": "/usr/local/bin/derb", | ||
| "enc2xs": "/usr/local/bin/enc2xs", | ||
| "encguess": "/usr/local/bin/encguess", | ||
| "envsubst": "/usr/local/bin/envsubst", | ||
| "foldseek": "/usr/local/bin/foldseek", | ||
| "gawk": "/usr/local/bin/gawk", | ||
| "gawk-5.3.0": "/usr/local/bin/gawk-5.3.0", | ||
| "gawkbug": "/usr/local/bin/gawkbug", | ||
| "genbrk": "/usr/local/bin/genbrk", | ||
| "gencfu": "/usr/local/bin/gencfu", | ||
| "gencnval": "/usr/local/bin/gencnval", | ||
| "gendict": "/usr/local/bin/gendict", | ||
| "genrb": "/usr/local/bin/genrb", | ||
| "gettext": "/usr/local/bin/gettext", | ||
| "gettext.sh": "/usr/local/bin/gettext.sh", | ||
| "gettextize": "/usr/local/bin/gettextize", | ||
| "h2ph": "/usr/local/bin/h2ph", | ||
| "h2xs": "/usr/local/bin/h2xs", | ||
| "icu-config": "/usr/local/bin/icu-config", | ||
| "icuexportdata": "/usr/local/bin/icuexportdata", | ||
| "icuinfo": "/usr/local/bin/icuinfo", | ||
| "idn2": "/usr/local/bin/idn2", | ||
| "infocmp": "/usr/local/bin/infocmp", | ||
| "infotocap": "/usr/local/bin/infotocap", | ||
| "instmodsh": "/usr/local/bin/instmodsh", | ||
| "json_pp": "/usr/local/bin/json_pp", | ||
| "libnetcfg": "/usr/local/bin/libnetcfg", | ||
| "lzcat": "/usr/local/bin/lzcat", | ||
| "lzcmp": "/usr/local/bin/lzcmp", | ||
| "lzdiff": "/usr/local/bin/lzdiff", | ||
| "lzegrep": "/usr/local/bin/lzegrep", | ||
| "lzfgrep": "/usr/local/bin/lzfgrep", | ||
| "lzgrep": "/usr/local/bin/lzgrep", | ||
| "lzless": "/usr/local/bin/lzless", | ||
| "lzma": "/usr/local/bin/lzma", | ||
| "lzmadec": "/usr/local/bin/lzmadec", | ||
| "lzmainfo": "/usr/local/bin/lzmainfo", | ||
| "lzmore": "/usr/local/bin/lzmore", | ||
| "makeconv": "/usr/local/bin/makeconv", | ||
| "mmseqs": "/usr/local/bin/mmseqs", | ||
| "mmseqs-server": "/usr/local/bin/mmseqs-server", | ||
| "msgattrib": "/usr/local/bin/msgattrib", | ||
| "msgcat": "/usr/local/bin/msgcat", | ||
| "msgcmp": "/usr/local/bin/msgcmp", | ||
| "msgcomm": "/usr/local/bin/msgcomm", | ||
| "msgconv": "/usr/local/bin/msgconv", | ||
| "msgen": "/usr/local/bin/msgen", | ||
| "msgexec": "/usr/local/bin/msgexec", | ||
| "msgfilter": "/usr/local/bin/msgfilter", | ||
| "msgfmt": "/usr/local/bin/msgfmt", | ||
| "msggrep": "/usr/local/bin/msggrep", | ||
| "msginit": "/usr/local/bin/msginit", | ||
| "msgmerge": "/usr/local/bin/msgmerge", | ||
| "msgunfmt": "/usr/local/bin/msgunfmt", | ||
| "msguniq": "/usr/local/bin/msguniq", | ||
| "ncurses6-config": "/usr/local/bin/ncurses6-config", | ||
| "ncursesw6-config": "/usr/local/bin/ncursesw6-config", | ||
| "ngettext": "/usr/local/bin/ngettext", | ||
| "openssl": "/usr/local/bin/openssl", | ||
| "perl": "/usr/local/bin/perl", | ||
| "perl5.32.1": "/usr/local/bin/perl5.32.1", | ||
| "perlbug": "/usr/local/bin/perlbug", | ||
| "perldoc": "/usr/local/bin/perldoc", | ||
| "perlivp": "/usr/local/bin/perlivp", | ||
| "perlthanks": "/usr/local/bin/perlthanks", | ||
| "piconv": "/usr/local/bin/piconv", | ||
| "pkgdata": "/usr/local/bin/pkgdata", | ||
| "pl2pm": "/usr/local/bin/pl2pm", | ||
| "pod2html": "/usr/local/bin/pod2html", | ||
| "pod2man": "/usr/local/bin/pod2man", | ||
| "pod2text": "/usr/local/bin/pod2text", | ||
| "pod2usage": "/usr/local/bin/pod2usage", | ||
| "podchecker": "/usr/local/bin/podchecker", | ||
| "prove": "/usr/local/bin/prove", | ||
| "ptar": "/usr/local/bin/ptar", | ||
| "ptardiff": "/usr/local/bin/ptardiff", | ||
| "ptargrep": "/usr/local/bin/ptargrep", | ||
| "recode-sr-latin": "/usr/local/bin/recode-sr-latin", | ||
| "reset": "/usr/local/bin/reset", | ||
| "shasum": "/usr/local/bin/shasum", | ||
| "splain": "/usr/local/bin/splain", | ||
| "streamzip": "/usr/local/bin/streamzip", | ||
| "tabs": "/usr/local/bin/tabs", | ||
| "tic": "/usr/local/bin/tic", | ||
| "toe": "/usr/local/bin/toe", | ||
| "tput": "/usr/local/bin/tput", | ||
| "tset": "/usr/local/bin/tset", | ||
| "unlzma": "/usr/local/bin/unlzma", | ||
| "unxz": "/usr/local/bin/unxz", | ||
| "wget": "/usr/local/bin/wget", | ||
| "xgettext": "/usr/local/bin/xgettext", | ||
| "xml2-config": "/usr/local/bin/xml2-config", | ||
| "xmlcatalog": "/usr/local/bin/xmlcatalog", | ||
| "xmllint": "/usr/local/bin/xmllint", | ||
| "xsubpp": "/usr/local/bin/xsubpp", | ||
| "xz": "/usr/local/bin/xz", | ||
| "xzcat": "/usr/local/bin/xzcat", | ||
| "xzcmp": "/usr/local/bin/xzcmp", | ||
| "xzdec": "/usr/local/bin/xzdec", | ||
| "xzdiff": "/usr/local/bin/xzdiff", | ||
| "xzegrep": "/usr/local/bin/xzegrep", | ||
| "xzfgrep": "/usr/local/bin/xzfgrep", | ||
| "xzgrep": "/usr/local/bin/xzgrep", | ||
| "xzless": "/usr/local/bin/xzless", | ||
| "xzmore": "/usr/local/bin/xzmore", | ||
| "zipdetails": "/usr/local/bin/zipdetails", | ||
| "env-execute": "/usr/local/env-execute" | ||
| } |
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