Wave CI #922
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| name: Wave CI | |
| on: | |
| push: | |
| branches: | |
| - 'master' | |
| schedule: | |
| - cron: '0 15 * * *' | |
| jobs: | |
| build: | |
| name: Wave showcase example | |
| if: "github.event == 'push' || github.repository != github.event.pull_request.head.repo.full_name" | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 15 | |
| steps: | |
| - name: Environment | |
| run: env | sort | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 1 | |
| submodules: true | |
| - name: Setup env | |
| run: | | |
| rm -f $HOME/.gitconfig; | |
| mkdir -p "$HOME/.nextflow"; | |
| echo "providers.github.auth='$NXF_GITHUB_ACCESS_TOKEN'" > "$HOME/.nextflow/scm" | |
| env: | |
| NXF_GITHUB_ACCESS_TOKEN: ${{ secrets.NXF_GITHUB_ACCESS_TOKEN }} | |
| - name: Setup Java ${{ matrix.java_version }} | |
| uses: actions/setup-java@v3 | |
| with: | |
| java-version: 11 | |
| distribution: 'adopt' | |
| architecture: x64 | |
| - name: Install | |
| run: | | |
| curl -fsSL get.nextflow.io | bash | |
| sudo mv nextflow /usr/local/bin | |
| - name: Tests | |
| run: | | |
| (cd example1; bash run.sh) | |
| (cd example2; bash run.sh) | |
| (cd example6; bash run.sh) | |
| env: | |
| TOWER_ACCESS_TOKEN: ${{ secrets.TOWER_ACCESS_TOKEN }} | |
| AWS_ACCESS_KEY_ID: ${{secrets.TOWER_CI_AWS_ACCESS}} | |
| AWS_SECRET_ACCESS_KEY: ${{secrets.TOWER_CI_AWS_SECRET}} | |
| - name: Publish tests results | |
| if: failure() | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: test-results | |
| path: | | |
| **/.nextflow* |