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Myrthe2 #181

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wants to merge 13 commits into from
Closed

Myrthe2 #181

wants to merge 13 commits into from

Commits on May 4, 2023

  1. [SVENJA] Try to pu Myrthes changes on top of the latest chopper.

    @smehringer
    smehringer committed May 4, 2023
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Commits on May 8, 2023

  1. [FIX] Some fixes and updates.

    @smehringer
    smehringer committed May 8, 2023
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Commits on May 15, 2023

  1. [FIX] Last part was not adapted.

    @smehringer
    smehringer committed May 15, 2023
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Commits on May 17, 2023

  1. [FIX] Always resize empty_bins and cum_sum_sizes.

    @smehringer
    smehringer committed May 17, 2023
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  2. [FIX] fix the calculation of num_user_bins.

    @smehringer
    smehringer committed May 17, 2023
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Commits on May 19, 2023

  1. made this version compatible with calling chopper from raptor. 

    I also made sure that empty bins are again inserted according to the descending order of the k-mer counts .
    @MyrtheW
    MyrtheW committed May 19, 2023
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Commits on May 24, 2023

  1. fixes bcs of ordering empty bin cum sizes

    @MyrtheW
    MyrtheW committed May 24, 2023
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  2. update shape parameter

    @MyrtheW
    MyrtheW committed May 24, 2023
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  3. update shape parameter

    @MyrtheW
    MyrtheW committed May 24, 2023
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Commits on May 31, 2023

  1. minor optimizations

    @MyrtheW
    MyrtheW committed May 31, 2023
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  2. minor optimizations

    @MyrtheW
    MyrtheW committed May 31, 2023
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  3. Merge remote-tracking branch 'origin/myrthe2' into myrthe2

    @MyrtheW
    MyrtheW committed May 31, 2023
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Commits on Aug 17, 2023

  1. handle if HLL file was deleted or corrupted

    @MyrtheW
    MyrtheW committed Aug 17, 2023
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