[MISC] automatic linting

seqan · Nov 2, 2023 · d73398b · d73398b
1 parent 5467c5b
commit d73398b
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Showing 4 changed files with 16 additions and 4 deletions.
diff --git a/src/chopper.cpp b/src/chopper.cpp
@@ -56,7 +56,8 @@ int main(int argc, char const * argv[])
 
         chopper::sketch::check_filenames(filenames, config);
 
-        config.hibf_config.input_fn = chopper::input_functor{filenames, config.precomputed_files, config.k, config.window_size};
+        config.hibf_config.input_fn =
+            chopper::input_functor{filenames, config.precomputed_files, config.k, config.window_size};
         config.hibf_config.number_of_user_bins = filenames.size();
 
         exit_code |= chopper::layout::execute(config, filenames);

diff --git a/src/util/display_layout/general.cpp b/src/util/display_layout/general.cpp
@@ -297,7 +297,13 @@ int execute(config const & cfg)
 
             for (auto const & filename : filenames[user_bin.idx])
             {
-                process_file(filename, current_kmer_set, current_kmers, sketch, fill_current_kmers, chopper_config.k, chopper_config.window_size);
+                process_file(filename,
+                             current_kmer_set,
+                             current_kmers,
+                             sketch,
+                             fill_current_kmers,
+                             chopper_config.k,
+                             chopper_config.window_size);
             }
 
             // Compute set intersection: shared_kmers = shared_kmers ∩ current_kmers

diff --git a/src/util/display_layout/process_file.cpp b/src/util/display_layout/process_file.cpp
@@ -97,7 +97,10 @@ void process_file(std::string const & filename,
     }
 }
 
-void process_file(std::string const & filename, std::vector<uint64_t> & current_kmers, uint8_t const kmer_size, uint8_t const window_size)
+void process_file(std::string const & filename,
+                  std::vector<uint64_t> & current_kmers,
+                  uint8_t const kmer_size,
+                  uint8_t const window_size)
 {
     if (filename.ends_with(".minimiser"))
     {

diff --git a/src/util/display_layout/shared.hpp b/src/util/display_layout/shared.hpp
@@ -25,7 +25,9 @@ struct config
 void execute_general(config const & cfg);
 void execute_sizes(config const & cfg);
 
-void process_file(std::string const & filename, std::vector<uint64_t> & current_kmers, uint8_t const kmer_size,
+void process_file(std::string const & filename,
+                  std::vector<uint64_t> & current_kmers,
+                  uint8_t const kmer_size,
                   uint8_t const window_size);
 
 void process_file(std::string const & filename,