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updated submodule
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@LucaMarconato
LucaMarconato committed Nov 8, 2024
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2 changes: 1 addition & 1 deletion docs/tutorials/notebooks
Submodule notebooks updated 52 files
+4 −0 .gitignore
+10 −10 .pre-commit-config.yaml
+1 −1 README.md
+ − _static/img/interchangeability_labels_polygons.png
+ − _static/img/models1.png
+ − _static/img/models2.png
+ − _static/img/speed.png
+ − _static/img/table.png
+ − _static/img/visium_hd.jpg
+ − _static/img/xenium.png
+5 −1 conf.py
+63 −24 datasets/README.md
+99 −6 notebooks.md
+2 −2 notebooks/developers_resources/storage_format/multiple_elements.ipynb
+186 −138 notebooks/examples/aggregation.ipynb
+79 −96 notebooks/examples/alignment_using_landmarks.ipynb
+ − notebooks/examples/attachments/coordinate_systems.png
+ − notebooks/examples/attachments/coordinate_transformations.png
+ − notebooks/examples/attachments/joins_small.png
+ − notebooks/examples/attachments/multi_table_example.png
+ − notebooks/examples/attachments/napari_visium_hd.png
+ − notebooks/examples/attachments/napari_visium_hd_animation0.gif
+ − notebooks/examples/attachments/napari_visium_hd_animation1.gif
+ − notebooks/examples/attachments/spatialdata_registration.png
+ − notebooks/examples/attachments/table_slide.png
+389 −157 notebooks/examples/densenet.ipynb
+1 −1 notebooks/examples/densenet_utils.py
+45 −0 notebooks/examples/generate_toc.py
+1,498 −0 notebooks/examples/labels_shapes_interchangeability.ipynb
+1,049 −0 notebooks/examples/models1.ipynb
+5,467 −0 notebooks/examples/models2.ipynb
+368 −70 notebooks/examples/napari_rois.ipynb
+120 −116 notebooks/examples/spatial_query.ipynb
+1,105 −0 notebooks/examples/speed_up_illustration.ipynb
+240 −63 notebooks/examples/squidpy_integration.ipynb
+2,544 −0 notebooks/examples/tables.ipynb
+75 −82 notebooks/examples/technology_cosmx.ipynb
+172 −0 notebooks/examples/technology_curio.ipynb
+58 −32 notebooks/examples/technology_merfish.ipynb
+120 −43 notebooks/examples/technology_mibitof.ipynb
+415 −0 notebooks/examples/technology_stereoseq.ipynb
+166 −88 notebooks/examples/technology_visium.ipynb
+1,840 −0 notebooks/examples/technology_visium_hd.ipynb
+732 −0 notebooks/examples/technology_xenium.ipynb
+842 −286 notebooks/examples/transformations.ipynb
+250 −215 notebooks/paper_reproducibility/00_xenium_and_visium.ipynb
+458 −296 notebooks/paper_reproducibility/01_xenium_and_visium.ipynb
+16 −8 notebooks/paper_reproducibility/02_xenium_and_visium.ipynb
+1 −1 notebooks/paper_reproducibility/03_annotate_visium_cell2location.ipynb
+20 −20 notebooks/paper_reproducibility/lundeberg.ipynb
+1 −1 notebooks/paper_reproducibility/nsclc_cosmx.ipynb
+3 −0 pyproject.toml

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