Update SQLite to fix compilation on Fedora (#173)

Due to change in Fedora [0] that turns on more errors and/or turns some warnings into errors, sqlite3 1.4.4 stopped compiling successfully on Fedora >= 40.

Bumping the sqlite3 gem version fixes that. Since 3.3 branch is only relevant for Ruby >= 3.3 we don't have to worry about keeping compatibility with earlier Rubies (like 2.5 on RHEL 8).

It was fixed by sqlite3 upstream in a commit [1] first present in sqlite3 1.5.0.

[0] https://fedoraproject.org/wiki/Changes/PortingToModernC
[1] sparklemotion/sqlite3-ruby@abdbfd5

Gemfile.lock

@@ -111,7 +111,7 @@ GEM
     matrix (0.4.2)
     method_source (1.0.0)
     mini_mime (1.1.2)
-    mini_portile2 (2.6.1)
+    mini_portile2 (2.8.7)
     minitest (5.15.0)
     net-imap (0.2.2)
       digest
@@ -127,8 +127,8 @@ GEM
       net-protocol
       timeout
     nio4r (2.7.0)
-    nokogiri (1.12.5)
-      mini_portile2 (~> 2.6.1)
+    nokogiri (1.16.6)
+      mini_portile2 (~> 2.8.2)
       racc (~> 1.4)
     pg (1.5.4)
     public_suffix (4.0.7)
@@ -199,7 +199,8 @@ GEM
       actionpack (>= 5.2)
       activesupport (>= 5.2)
       sprockets (>= 3.0.0)
-    sqlite3 (1.4.4)
+    sqlite3 (2.0.2)
+      mini_portile2 (~> 2.8.0)
     strscan (3.1.0)
     thor (1.2.2)
     tilt (2.3.0)