Skip to content

Issues: sanger/sequencescape

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

59 Open 554 Closed
59 Open 554 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Y24-495 - As a TL I want to know when creating or updating sample metadata in the EGA/ENA fail so that we can catch errors early. Data integrity Data Integrity
#4540 opened Dec 3, 2024 by TWJW-SANGER
3 tasks
Y24-494 - As a TL I would like to understand which samples have had metadata updated in SequenceScape between 1/07/2024 and 29/11/2024 and are in a study with data released to the EGA so that we can ensure the data released is correct. Data integrity Data Integrity Research Research only
#4539 opened Dec 3, 2024 by TWJW-SANGER
3 tasks
1
Y24-492 - Tol BIOSCAN need a digital link between identifiers to enable them to report on the samples they have processed Research Research only
#4537 opened Dec 3, 2024 by sabrine33
2 tasks
@sabrine33
1
Y24-481 - Sequence Scape Study Setup Page to Accomodate Updates to the Sanger Data Sharing Policy Size: S Small - low effort & risk
#4534 opened Nov 27, 2024 by Stan1520
1
@BenTopping
Y24-480 - Store HUMFRE codes in SS and MLWH databases Size: M Medium - medium effort & risk
#4527 opened Nov 27, 2024 by Stan1520
2 tasks
2
@sabrine33
Y24-478 - Complete documentation of API v2 resources Documentation Technical Debt
#4522 opened Nov 26, 2024 by sdjmchattie
Y24-477 - Make sure API v2 endpoints will not allow deletion of resources Data integrity Data Integrity Technical Debt
#4521 opened Nov 26, 2024 by sdjmchattie
3 tasks
Y24-471 - [BUG] date_of_sample_collection is missing from the sample show page Bug Bug in code
#4514 opened Nov 22, 2024 by neilsycamore
Y24-470 - As a Data Release Manager (Quan L) I would like the "Resequencing" option from the Study Type field on the Study setup page to be removed Data Release
#4508 opened Nov 20, 2024 by wendyyang
Y24-462 - Update study release strategy/timing data to conform to new validation rules.
#4507 opened Nov 18, 2024 by neilsycamore
Y24-454 - Update required fields in library manifests Size: S Small - low effort & risk
#4504 opened Nov 13, 2024 by neilsycamore
Y24-447 - Address frequent Indirect Changes to code coverage Technical Debt
#4495 opened Nov 8, 2024 by StephenHulme
9 tasks
Y24-446 - Remove code about storing retention instruction in custom metadata, and migrate legacy data into labware field
#4493 opened Nov 8, 2024 by andrewsparkes
Y24-430 - Removing controls from partial plates when cherrypicking Cherrypicking RVI RVI project Size: S Small - low effort & risk
#4461 opened Oct 25, 2024 by SHIV5T3R
3 tasks
Y24-429 - Check feasibility of cDNA Prep submission Feature Flag A clean-up story for a feature flag scRNA - cDNA prep scRNA Size: L Large - large effort & risk
#4460 opened Oct 25, 2024 by KatyTaylor
4 tasks
1
@yoldas
Y24-425 - As LeGo, we would like to remove the current ability to upload a “non-standard” access agreement in Sequencescape study setup LeGo
#4452 opened Oct 24, 2024 by harrietc52
3 tasks
Y24-424 - As LeGo, we want to ensure we can access the correct DAA when we get a request for data from an External Researcher
#4451 opened Oct 24, 2024 by harrietc52
Y24-423 - As HumGen, I would like to be able to upload a DAA to a study
#4449 opened Oct 24, 2024 by harrietc52
2 tasks
Y24-422 - As an SSR, I would like to bulk upload study data from a CSV file generated from the SSR's Study Setup Google Form into Sequencescape LeGo Size: L Large - large effort & risk
#4446 opened Oct 23, 2024 by harrietc52
22 tasks
1
Y24-420 - As LeGo, we would like the new study set up fields to be added to the MLWH LeGo Size: S Small - low effort & risk
#4444 opened Oct 23, 2024 by harrietc52
11 tasks
Y24-419 - As LeGo, we would like the new study creation fields to be added to the MLWH LeGo Size: M Medium - medium effort & risk
#4443 opened Oct 23, 2024 by harrietc52
18 tasks
@wendyyang
Y24-418 - [BUG] Provide feedback mechanism from the Sequencescape job worker once Labware has been created
#4442 opened Oct 23, 2024 by StephenHulme
Y24-409 - Addition of HumFre Codes to manifests Size: M Medium - medium effort & risk
#4431 opened Oct 18, 2024 by Stan1520
3 tasks
@sabrine33
2
Y24-405 - add management features for the faculty sponsor list Size: S Small - low effort & risk Value: 2 Value to the insitute is low
#4424 opened Oct 17, 2024 by neilsycamore
Y24-402 - Specify 'no. pools' rather than 'no. samples per pool' in submission scRNA - cDNA prep scRNA Size: M Medium - medium effort & risk
#4423 opened Oct 17, 2024 by KatyTaylor
5 tasks done
1
@dasunpubudumal
ProTip! no:milestone will show everything without a milestone.