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DPL-1100: Upgrading dependencies and doing relevant code updates for dependency updates #917

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Feb 22, 2024
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4177022
Bump werkzeug from 2.3.6 to 3.0.1
dependabot[bot] Oct 25, 2023
4366a88
Merge pull request #861 from sanger/dependabot/pip/werkzeug-3.0.1
yoldas Dec 8, 2023
250fa2f
Bump aiohttp from 3.9.0b0 to 3.9.0
dependabot[bot] Dec 8, 2023
aa0ae39
Merge pull request #863 from sanger/dependabot/pip/aiohttp-3.9.0
yoldas Dec 8, 2023
d982d0d
Bump cryptography from 41.0.5 to 41.0.6
dependabot[bot] Dec 8, 2023
ac2442f
Merge pull request #862 from sanger/dependabot/pip/cryptography-41.0.6
yoldas Dec 8, 2023
90584ca
Bump pytest from 7.4.0 to 7.4.3
dependabot[bot] Dec 8, 2023
f8a41c3
Merge pull request #860 from sanger/dependabot/pip/pytest-7.4.3
yoldas Dec 8, 2023
da3df1e
Bump pymongo from 4.4.1 to 4.6.1
dependabot[bot] Dec 11, 2023
bddd85b
Merge pull request #869 from sanger/dependabot/pip/pymongo-4.6.1
yoldas Dec 11, 2023
8e69b30
Bump flask-apscheduler from 1.12.4 to 1.13.1
dependabot[bot] Dec 11, 2023
843edb1
Bump tj-actions/changed-files from 23 to 41 in /.github/workflows
dependabot[bot] Jan 2, 2024
9a6eaa2
Merge pull request #879 from sanger/dependabot/github_actions/dot-git…
yoldas Jan 3, 2024
757fddc
Bump more-itertools from 10.0.0 to 10.2.0
dependabot[bot] Jan 9, 2024
4842d0f
Merge pull request #881 from sanger/dependabot/pip/more-itertools-10.2.0
yoldas Jan 10, 2024
e524d29
Bump sqlalchemy from 2.0.19 to 2.0.25
dependabot[bot] Jan 10, 2024
ae3d09b
Merge pull request #880 from sanger/dependabot/pip/sqlalchemy-2.0.25
yoldas Jan 10, 2024
0ca689b
Bump coverage from 7.2.7 to 7.4.0
dependabot[bot] Jan 10, 2024
7b31e00
Merge pull request #877 from sanger/dependabot/pip/coverage-7.4.0
yoldas Jan 10, 2024
a607124
Bump black from 23.7.0 to 23.12.1
dependabot[bot] Jan 10, 2024
22b31ec
Merge pull request #876 from sanger/dependabot/pip/black-23.12.1
yoldas Jan 10, 2024
b807141
Bump mypy from 1.4.1 to 1.8.0
dependabot[bot] Jan 10, 2024
5a09c41
Merge pull request #875 from sanger/dependabot/pip/mypy-1.8.0
yoldas Jan 10, 2024
63b02ee
Bump paramiko from 3.3.1 to 3.4.0
dependabot[bot] Jan 10, 2024
ff3dda4
Merge pull request #873 from sanger/dependabot/pip/paramiko-3.4.0
yoldas Jan 10, 2024
15fb93e
Bump pyodbc from 4.0.39 to 5.0.1
dependabot[bot] Jan 10, 2024
7f0fbed
Merge pull request #870 from sanger/dependabot/pip/pyodbc-5.0.1
yoldas Jan 10, 2024
4d3d16c
Bump types-python-dateutil from 2.8.19.14 to 2.8.19.20240106
dependabot[bot] Jan 11, 2024
ccf5beb
Merge pull request #887 from sanger/dependabot/pip/types-python-dateu…
yoldas Jan 11, 2024
74ed897
Bump colorlog from 6.7.0 to 6.8.0
dependabot[bot] Jan 11, 2024
d2dc447
Merge pull request #886 from sanger/dependabot/pip/colorlog-6.8.0
yoldas Jan 11, 2024
a191ec8
Bump flake8-bugbear from 23.7.10 to 24.1.17
dependabot[bot] Jan 18, 2024
bf57827
Merge pull request #892 from sanger/dependabot/pip/flake8-bugbear-24.…
yoldas Jan 18, 2024
12727f7
Bump jinja2 from 3.1.2 to 3.1.3
dependabot[bot] Jan 18, 2024
bbe612a
Merge pull request #888 from sanger/dependabot/pip/jinja2-3.1.3
yoldas Jan 18, 2024
874b9b1
Bump aiohttp from 3.9.0 to 3.9.2
dependabot[bot] Jan 30, 2024
6ec4a6f
Merge pull request #900 from sanger/dependabot/pip/aiohttp-3.9.2
yoldas Feb 5, 2024
a4cb01e
Merge branch 'develop' into dependabot/pip/flask-apscheduler-1.13.1
stevieing Feb 7, 2024
6590b27
Merge pull request #864 from sanger/dependabot/pip/flask-apscheduler-…
stevieing Feb 7, 2024
ecbbd97
Bump responses from 0.23.3 to 0.24.1
dependabot[bot] Feb 7, 2024
e4cc556
Merge pull request #884 from sanger/dependabot/pip/responses-0.24.1
stevieing Feb 7, 2024
419ad11
Bump flake8-bugbear from 24.1.17 to 24.2.6
dependabot[bot] Feb 8, 2024
0a2ab69
Merge pull request #904 from sanger/dependabot/pip/flake8-bugbear-24.2.6
yoldas Feb 12, 2024
e3fc104
Bump python-dotenv from 1.0.0 to 1.0.1
dependabot[bot] Feb 12, 2024
70daa6d
Merge pull request #894 from sanger/dependabot/pip/python-dotenv-1.0.1
yoldas Feb 12, 2024
585205a
Bump coverage from 7.4.0 to 7.4.1
dependabot[bot] Feb 12, 2024
056e12b
Merge pull request #896 from sanger/dependabot/pip/coverage-7.4.1
yoldas Feb 12, 2024
c925c1a
Bump pyodbc from 5.0.1 to 5.1.0
dependabot[bot] Feb 12, 2024
a8207fd
Merge pull request #903 from sanger/dependabot/pip/pyodbc-5.1.0
yoldas Feb 12, 2024
c41ac53
Bump colorlog from 6.8.0 to 6.8.2
dependabot[bot] Feb 12, 2024
74e6b96
Merge pull request #897 from sanger/dependabot/pip/colorlog-6.8.2
dasunpubudumal Feb 19, 2024
a28b120
Bump pytest from 7.4.3 to 8.0.1
dependabot[bot] Feb 19, 2024
5734768
Merge pull request #911 from sanger/dependabot/pip/pytest-8.0.1
dasunpubudumal Feb 19, 2024
4d3f34b
Bump flask from 2.3.2 to 3.0.2
dependabot[bot] Feb 19, 2024
385b7aa
Merge pull request #901 from sanger/dependabot/pip/flask-3.0.2
dasunpubudumal Feb 19, 2024
7695904
Bump cryptography from 41.0.7 to 42.0.2
dependabot[bot] Feb 19, 2024
9ae3f47
Merge pull request #910 from sanger/dependabot/pip/cryptography-42.0.2
dasunpubudumal Feb 19, 2024
5895b28
Bump black from 23.12.1 to 24.2.0
dependabot[bot] Feb 19, 2024
01b89cc
Updated black refactoring files
dasunpubudumal Feb 19, 2024
346f84e
Merge pull request #906 from sanger/dependabot/pip/black-24.2.0
dasunpubudumal Feb 19, 2024
7008498
Bump responses from 0.24.1 to 0.25.0
dependabot[bot] Feb 19, 2024
c157d14
Merge pull request #907 from sanger/dependabot/pip/responses-0.25.0
dasunpubudumal Feb 19, 2024
c71109a
Bump sqlalchemy from 2.0.25 to 2.0.27
dependabot[bot] Feb 19, 2024
7090be3
Merge pull request #908 from sanger/dependabot/pip/sqlalchemy-2.0.27
dasunpubudumal Feb 19, 2024
410edfb
Bump mysql-connector-python from 8.1.0 to 8.3.0
dependabot[bot] Feb 20, 2024
8287dcc
Testing out implementing mock methods using MagicMock
dasunpubudumal Feb 20, 2024
4a7d941
Fixing issues with black and mypy
dasunpubudumal Feb 20, 2024
acc8a66
Fixing issues with black and mypy
dasunpubudumal Feb 21, 2024
eae5839
Refactoring minor updates
dasunpubudumal Feb 21, 2024
27f8796
Merge pull request #890 from sanger/dependabot/pip/mysql-connector-py…
dasunpubudumal Feb 21, 2024
0af4a2a
Update .release-version
dasunpubudumal Feb 22, 2024
c45e067
Merge pull request #916 from sanger/version-upgrade
dasunpubudumal Feb 22, 2024
78404d2
Merge branch 'master' into develop
dasunpubudumal Feb 22, 2024
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Bump flake8-bugbear from 23.7.10 to 24.1.17
Bumps [flake8-bugbear](https://github.com/PyCQA/flake8-bugbear) from 23.7.10 to 24.1.17.
- [Release notes](https://github.com/PyCQA/flake8-bugbear/releases)
- [Commits](PyCQA/flake8-bugbear@23.7.10...24.1.17)

---
updated-dependencies:
- dependency-name: flake8-bugbear
  dependency-type: direct:development
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
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dependabot[bot] authored Jan 18, 2024
commit a191ec8513a4da81f4f33ac9f9fa90405691c20c
24 changes: 12 additions & 12 deletions Pipfile.lock

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