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remove duplicate container directive
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first directive is overwritten by second one, have tested that 2nd is correct! :)
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tkchafin authored Oct 9, 2024
1 parent 93e3c33 commit f0f13ed
Showing 1 changed file with 1 addition and 3 deletions.
4 changes: 1 addition & 3 deletions modules/local/fetch_gbif_metadata.nf
Original file line number Diff line number Diff line change
Expand Up @@ -3,9 +3,7 @@ process FETCH_GBIF_METADATA {
label 'process_single'

conda "conda-forge::python=3.9.1"
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/python:3.9--1' :
'quay.io/biocontainers/python:3.9--1' }"

container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/mulled-v2-5cada6dc649cb78fe4ccd00b84f9dc4ee50dd363:506b314b4875ac1041355eb6ab70f2d7f87c528c-0' :
'quay.io/biocontainers/mulled-v2-5cada6dc649cb78fe4ccd00b84f9dc4ee50dd363:506b314b4875ac1041355eb6ab70f2d7f87c528c-0' }"
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