Fixing CI data

sanger-tol · Nov 21, 2024 · 7aac083 · 7aac083
1 parent 2334287
commit 7aac083
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
@@ -70,12 +70,12 @@ jobs:
       - name: Download test data
         # Download A fungal test data set that is full enough to show some real output.
         run: |
-          pwd
+          ls
           curl https://tolit.cog.sanger.ac.uk/test-data/resources/ascc/asccTinyTest_V2.tar.gz | tar xzf -
 
-          cp asccTinyTest_V2/assembly/Pyoeliiyoelii17XNL_assembly.fa asccTinyTest_V2/assembly/Pyoeliiyoelii17XNL_assembly_hap.fa
+          cp /home/runner/work/ascc/ascc/asccTinyTest_V2/assembly/Pyoeliiyoelii17XNL_assembly.fa /home/runner/work/ascc/ascc/asccTinyTest_V2/assembly/Pyoeliiyoelii17XNL_assembly_hap.fa
 
-          cp ./sanger-ascc/${{ steps.branch-names.outputs.current_branch }}/assets/github_testing/data/Pyoeliiyoelii17XNL_mitochondrion_ncbi.fa ./asccTinyTest_V2/assembly/mito.fa
+          cp /home/runner/work/ascc/ascc/sanger-ascc/${{ steps.branch-names.outputs.current_branch }}/assets/github_testing/data/Pyoeliiyoelii17XNL_mitochondrion_ncbi.fa /home/runner/work/ascc/ascc/asccTinyTest_V2/assembly/mito.fa
 
       - name: Temporary ASCC Diamond Data
         run: |