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Update README.md
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updated the docker/singularity urls in the readme
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epaule authored Nov 21, 2024
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Expand Up @@ -18,11 +18,11 @@ MicroFinder.sh input_fasta max_scaffold_cutoff

or with singularity:
```
singularity run -B `pwd`:/data docker://ghcr.io/aquatic-symbiosis-genomics-project/microfinder:latest /data/bLarArg3.1.HAP1.primary.curated.fa 1000000
singularity run -B `pwd`:/data docker://ghcr.io/sanger-tol/microfinder:main /data/bLarArg3.1.HAP1.primary.curated.fa 1000000
```

or docker:
```
docker run -v `pwd`:/data ghcr.io/aquatic-symbiosis-genomics-project/microfinder:latest /data/bLarArg3.1.HAP1.primary.curated.fa 1000000
docker run -v `pwd`:/data ghcr.io/sanger-tol/microfinder:main /data/bLarArg3.1.HAP1.primary.curated.fa 1000000
```

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