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Releases: sanger-bentley-group/GBS-Typer-sanger-nf

v1.0.12: Improve stability and compatibility

15 Oct 15:04
@HarryHung HarryHung
v1.0.12
1e27ba3
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v1.0.12: Improve stability and compatibility Latest
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What's Changed

  • Workaround for srst2 mkfifo failure when using latest Nextflow and Singularity by @HarryHung in #92
  • Run getmlst.py once and cache the result per pipeline run by @HarryHung in #93
  • Move serotype database to local by @HarryHung in #94
  • Improve stability and compatibility by @HarryHung in #95

New Contributors

Full Changelog: v1.0.11...v1.0.12

Contributors

HarryHung
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v1.0.11: Merge pull request #90 from sanger-bentley-group/dev

24 Apr 09:12
@blue-moon22 blue-moon22
v1.0.11
d98cb52
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v1.0.11: Merge pull request #90 from sanger-bentley-group/dev 
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v1.0.10: Merge pull request #88 from sanger-bentley-group/dev

28 Mar 14:47
@blue-moon22 blue-moon22
v1.0.10
4ab2c27
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v1.0.10: Merge pull request #88 from sanger-bentley-group/dev
  • Set serotyping min depth to 0 in config and default in python script
  • Update readme
  • Use defaults for SRST2 in serotyping
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v1.0.9: Merge pull request #85 from sanger-bentley-group/dev

24 Mar 16:34
@blue-moon22 blue-moon22
v1.0.9
ed997ea
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v1.0.8: Merge pull request #82 from sanger-bentley-group/dev

06 Feb 20:58
@blue-moon22 blue-moon22
v1.0.8
1af704a
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v1.0.7: Merge pull request #79 from sanger-bentley-group/dev

16 Nov 15:07
@blue-moon22 blue-moon22
v1.0.7
da211fd
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v1.0.6: Merge pull request #77 from sanger-bentley-group/dev

25 Aug 09:43
@blue-moon22 blue-moon22
v1.0.6
bd134e1
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v1.0.6: Merge pull request #77 from sanger-bentley-group/dev
  • Fix moving non-existent files in pbp_typer
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v1.0.5: Merge pull request #74 from sanger-bentley-group/dev

17 Aug 16:34
@blue-moon22 blue-moon22
v1.0.5
b30d7f3
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v1.0.4: Merge pull request #72 from sanger-bentley-group/dev

19 Jul 13:59
@blue-moon22 blue-moon22
v1.0.4
7248ad8
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v1.0.4: Merge pull request #72 from sanger-bentley-group/dev
  • Replace empty cps_type values with 'NT'
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v1.0.3: Merge pull request #70 from sanger-bentley-group/dev

14 Jul 13:18
@blue-moon22 blue-moon22
v1.0.3
ce5e4a2
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v1.0.3: Merge pull request #70 from sanger-bentley-group/dev 
Change version column name
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