Show help for offset option, closes #1084

salilab · Nov 9, 2023 · 756a172 · 756a172
1 parent c575056
commit 756a172
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/modules/multi_state/bin/multi_foxs.cpp b/modules/multi_state/bin/multi_foxs.cpp
@@ -193,6 +193,7 @@ int main(int argc, char* argv[]) {
     ("min_c2", po::value<double>(&min_c2)->default_value(-0.5, "-0.50"), "min c2 value")
     ("max_c2", po::value<double>(&max_c2)->default_value(2.0, "2.00"), "max c2 value")
     ("partial_profiles,p", "use precomputed partial profiles (default = true)")
+    ("offset,o", "use offset in fitting (default = false)")
     ("multi-model-pdb,m", po::value<int>(&multi_model_pdb)->default_value(1),
      "1 - read the first MODEL only (default), \
 2 - read each MODEL into a separate structure, \
@@ -213,7 +214,6 @@ recommended q value is 0.2")
   hidden.add_options()
     ("input-files", po::value< std::vector<std::string> >(),
      "input profile files")
-    ("offset,o", "use offset in fitting (default = false)")
     ;
 
   po::options_description cmdline_options;

diff --git a/modules/multi_state/bin/multi_foxs_combination.cpp b/modules/multi_state/bin/multi_foxs_combination.cpp
@@ -147,6 +147,7 @@ int main(int argc, char* argv[]) {
     ("max_c1", po::value<double>(&max_c1)->default_value(1.05, "1.05"), "max c1 value")
     ("min_c2", po::value<double>(&min_c2)->default_value(-0.5, "-0.50"), "min c2 value")
     ("max_c2", po::value<double>(&max_c2)->default_value(2.0, "2.00"), "max c2 value")
+    ("offset,o", "use offset in fitting (default = false)")
     ("multi-model-pdb,m", po::value<int>(&multi_model_pdb)->default_value(1),
      "1 - read the first MODEL only (default), \
 2 - read each MODEL into a separate structure, \
@@ -165,7 +166,6 @@ recommended q value is 0.2")
   hidden.add_options()
     ("input-files", po::value< std::vector<std::string> >(),
      "input profile files")
-    ("offset,o", "use offset in fitting (default = false)")
     ;
 
   po::options_description cmdline_options;