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Squashed 'modules/pmi/' changes from b7980dfc91..a27956e7de
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a27956e7de Revert to codecov v3 for now, v4 appears unavailable
3b789d5000 Use latest actions
82dfcb4537 Drop PMI1 text

git-subtree-dir: modules/pmi
git-subtree-split: a27956e7de811e1c975a68c01190e28e500c5b8f
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benmwebb committed Jan 31, 2024
1 parent 220cf5a commit 015844a
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2 changes: 1 addition & 1 deletion modules/pmi/.github/workflows/build.yml
Original file line number Diff line number Diff line change
Expand Up @@ -17,7 +17,7 @@ jobs:
runs-on: ${{ matrix.os }}

steps:
- uses: actions/checkout@v2
- uses: actions/checkout@v4
with:
submodules: true
- name: Setup conda and dependencies
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9 changes: 4 additions & 5 deletions modules/pmi/doc/resolution.md
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Expand Up @@ -18,9 +18,8 @@ a bead for every 10 residues, while resolution 1 uses a bead for each residue.
An all-atom representation is assigned a resolution of 0.

Many PMI functions take a `resolution` parameter to specify which resolution
to act on. These functions use IMP::pmi::tools::HierarchyDatabase to get
the closest resolution if the exact resolution requested is not available.
to act on. These functions will use the closest resolution if the exact
resolution requested is not available.

@note currently resolution is stored in the particle name. Ultimately it
is intended to use the IMP::atom::Representation decorator for this purpose
instead.
@note Internally, the IMP::atom::Representation decorator is used to keep track
of all system representations at the desired resolutions.

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