Workaround for the entries with problematic crosslinking-ms dataset l…

…ayout
salilab · Sep 10, 2024 · 412e6d0 · 412e6d0
1 parent 48c8415
commit 412e6d0
Showing 1 changed file with 18 additions and 2 deletions.
diff --git a/ihm_validation/mmcif_io.py b/ihm_validation/mmcif_io.py
@@ -750,8 +750,24 @@ def get_dataset_details(self) -> dict:
                     acc1 = 'PDB ID: ' + acc
                     dataset_comp['Details'].append(acc1)
                 elif isinstance(i, ihm.dataset.CXMSDataset):
-                    acc1 = self.get_dataset_xl_info(i._id)
-                    dataset_comp['Details'].append(acc1)
+                    details_ = ''
+
+                    if acc != utility.NA:
+                        details_ += f'ID: {acc}; '
+
+                    try:
+                        acc1 = self.get_dataset_xl_info(i._id)
+                    except (ValueError, IndexError):
+                        acc1 = utility.NA
+
+                    if acc1 != utility.NA:
+                        details_ += acc1
+
+                    if acc == acc1 == utility.NA:
+                        details_ = utility.NA
+
+                    dataset_comp['Details'].append(details_)
+
                 elif 'EMDB' in str(i.__class__.__name__):
                     acc1 = 'EMDB ID: ' + acc
                     dataset_comp['Details'].append(acc1)