chore: upgrade dependecy commit to rxn-onmt-utils + black, isort...

setup.cfg

@@ -30,7 +30,7 @@ install_requires =
     rxn-chem-utils>=1.1.4
     rxn-reaction-preprocessing>=2.0.2
     rxn-utils>=1.1.9
-    rxn-onmt-utils @ git+https://github.com/rxn4chemistry/rxn-onmt-utils.git@c8591b42bf04400e6c6c5847d5edb3326481ba34 #rxn-onmt-utils without rxn-opennmt-py depedency
+    rxn-onmt-utils @ git+https://github.com/rxn4chemistry/rxn-onmt-utils.git@d568d0fbeb11dace1de289d0d95fe1e00b22069d #rxn-onmt-utils without rxn-opennmt-py depedency
     OpenNMT-py>=3.5.1 # official onmt
 
 [options.packages.find]

src/rxn/onmt_models/scripts/rxn_onmt_train.py

@@ -2,13 +2,14 @@
 from typing import Tuple
 
 import click
+from rxn.onmt_utils import __version__ as onmt_utils_version
+from rxn.onmt_utils.train_command import OnmtTrainCommand
+from rxn.utilities.logging import setup_console_and_file_logger
+
 from rxn.onmt_models import __version__ as onmt_models_version
 from rxn.onmt_models import defaults
 from rxn.onmt_models.training_files import ModelFiles, OnmtPreprocessedFiles
 from rxn.onmt_models.utils import log_file_name_from_time, run_command
-from rxn.onmt_utils import __version__ as onmt_utils_version
-from rxn.onmt_utils.train_command import OnmtTrainCommand
-from rxn.utilities.logging import setup_console_and_file_logger
 
 logger = logging.getLogger(__name__)
 logger.addHandler(logging.NullHandler())
@@ -93,7 +94,9 @@ def main(
 
     config_file = model_files.next_config_file()
 
-    src_vocab, tgt_vocab = get_src_tgt_vocab(data=onmt_preprocessed_files.preprocess_prefix)
+    src_vocab, tgt_vocab = get_src_tgt_vocab(
+        data=onmt_preprocessed_files.preprocess_prefix
+    )
 
     # Init
     train_cmd = OnmtTrainCommand.train(
@@ -120,7 +123,7 @@ def main(
     # Write config file
     train_cmd.save_to_config_cmd(config_file)
 
-    # Actual training config file    
+    # Actual training config file
     command_and_args = train_cmd.execute_from_config_cmd(config_file)
     run_command(command_and_args)