Lecture slides, codes and materials for the 6-credit course on High Performance Computing.
Stefano Cozzini, Area Science Park, Trieste
Luca Tornatore, INAF - National Institute for Astrophysics, Astronomical Observatory of Trieste
Marco Celoria Area Science Park
Lab session are helped as well by Orfeo team at Area Science Park
Computational resource to be used: ORFEO cluster see https://orfeo-doc.areasciencepark.it/
The recordings of the lectures will be transferred here
- decent knowledge of linux command line interface
- decent knwoledge of a programming language ( C and/or C++ but even Fortran is fine)
- decent knowledge of scripting language ( python is fine but bash awk perl are also welcome}
google spreesheet where to insert your data
We plan to provide 30 hours frontal lecture, 16 hours of lab/tutorials and a few more hours as seminars. Here below the schedule for lectures and tutorials. Seminar will be announced during lecture and they will be generally on wednesday from 1 to 2mp
Lecture rooms:
The course should be completed by end of november. First weeek of January is spare time if something has beeen left behind.
| DATE | LECTURE | TUTORIALS |
|---|---|---|
| Wed, Sep 27 | [0] [Introduction to the course] (S.C. + L.T. + G.T) | |
| Thu, Sep 28 | [1] Introduction to HPC (S.C.) | |
| Fri, Sep 29 | [1] Tutorial 1: using the linux command line/ connecting to ORFEO | |
| Tue, Oct 03 | [2] [HPC Hardware] (S.C.) | |
| Thu, Oct 05 | [3] [HPC Software] (S.C.) | |
| Fri, Oct 06 | [2] Tutorial 2: exploring ORFEO | |
| Mon, Oct 06 | [3] [Parallel Programming concepts] (S.C.) | |
| Tue, Oct 10 | [4] [Introduction to MPI / 1] (S.C.) | |
| Thu, Oct 12 | [5] [Introduction to MPI / 2] (S.C.) | |
| Fri, Oct 13 | [Introduction to Network] (S.C.) | [3] [Tutorial 3: MPI ] |
| Tue, Oct 17 | [6] [Introduction to OpenMP / 1] (L.T.) | |
| Thu, Oct 19 | [7] [Introduction to OpenMP / 2] (L.T.) | |
| Fri, Oct 20 | [4] [Tutorial 4: OpenMP] | |
| Tue, Oct 24 | [8] [ More on MPI] (S.C.) | |
| Thu, Oct 26 | [9] [ More on OpenMP] (L.T.) | |
| Fri, Oct 27 | [5] [Tutorial 5: MPI and OpenMP, hybrid | |
| Tue, Oct 31 | [10] [Debugging and Profiling ] (L.T.) | |
| Tue, Nov 07 | [6] [Tutorial 6: Debugging & profiling] | |
| Thu, Nov 09 | [11] [Basic on Serial code Optimization 1] (L.T.) | |
| Fri, Nov 10 | [12] [Basic on Serial code Optimization 2] (L.T.) | |
| Fri, Nov 10 | [7] [Tutorial 7: Serial Code Optimization | |
| Tue, Nov 14 | [13] [Storage for HPC] (S.C.) | |
| Tue, Nov 21 | [14] [HPC libraries] (S.C.) | |
| Thu, Nov 23 | [15] [Basic on benchmarking] (S.C.) | |
| Tue, Nov 28 | [8] [Tutorial 8: HPC libs and benchmarking |
by Georg Hager and Gerhard Wellein Paperback: 356 pages Publication date July 2, 2010 Editors (Chapman & Hall/CRC Computational Science)
A lot of material is taken from this book. A very nice and complete reference. A little bit old however..
Thomas Sterling Matthew Anderson Maciej Brodowicz eBook ISBN: 9780124202153 Paperback ISBN: 9780124201583
Some of the materials of this book are presented during some lectures.
The source and pdf of the book (as well as lecture slides) can be found at this link: https:// https://theartofhpc.com//istc/istc.html, DOI: 10.5281/zenodo.49897
Some of the materials presented in classes are taken from this book.
by D. A. Patterson and J. L. Hennessy The Morgan Kaufmann Series in Computer Architecture and Design easily available as pdf on the net.
Paperback – October 15, 2014 by Alexander Supalov (Author), Andrey Semin (Author), Michael Klemm (Author), & 1 more ISBN-13: 978-1430264965 ISBN-10: 1430264969 Edition: 1st
Nice book but a little bit outdated