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Proposed fix for non-recognized holes
When the geometries resulting from an operation result in a MultiPolygon that only touch at points, a hole is not recognized in shapely but it is "recognized" by humans. To fix this problem, the hole needs to be recognized by shapely as part of a Polygon. One solution to fix this would be to buffer the geometry by a very small amount to force this switch from MultiPolygon to Polygon.
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