Scheduled #280
Workflow file for this run
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# Run all unit tests and integration tests for all Python versions | |
# and platforms at 3am UTC every day and on PRs to the main branch | |
name: Scheduled | |
on: | |
workflow_dispatch: | |
pull_request: | |
branches: | |
- main | |
# Run everyday at 3 am UTC | |
schedule: | |
- cron: "0 3 * * *" | |
env: | |
FORCE_COLOR: 3 | |
concurrency: | |
# github.workflow: name of the workflow, so that we don't cancel other workflows | |
# github.event.pull_request.number || github.ref: pull request number or branch name if not a pull request | |
group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }} | |
# Cancel in-progress runs when a new workflow with the same group name is triggered | |
# This avoids workflow runs on both pushes and PRs | |
cancel-in-progress: true | |
jobs: | |
style: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Setup python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: 3.12 | |
- name: Check style | |
run: | | |
python -m pip install pre-commit | |
pre-commit run -a | |
build: | |
needs: style | |
runs-on: ${{ matrix.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
os: [ubuntu-latest, macos-latest, windows-latest] | |
python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"] | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install Linux system dependencies | |
if: matrix.os == 'ubuntu-latest' | |
run: | | |
sudo apt-get update | |
sudo apt install gfortran gcc libopenblas-dev graphviz pandoc | |
sudo apt install texlive-full | |
- name: Install macOS system dependencies | |
if: matrix.os == 'macos-latest' | |
run: | | |
brew analytics off | |
brew install graphviz openblas libomp | |
brew reinstall gcc | |
- name: Install Windows system dependencies | |
if: matrix.os == 'windows-latest' | |
run: choco install graphviz --version=2.38.0.20190211 | |
- name: Install nox | |
run: python -m pip install nox | |
- name: Install SuiteSparse and SUNDIALS on GNU/Linux and macOS | |
if: matrix.os != 'windows-latest' | |
run: python -m nox -s pybamm-requires | |
- name: Run unit tests for GNU/Linux with Python 3.8, 3.9, 3.10, and 3.12; and for macOS and Windows with all Python versions | |
if: (matrix.os == 'ubuntu-latest' && matrix.python-version != 3.11) || (matrix.os != 'ubuntu-latest') | |
run: python -m nox -s unit | |
- name: Run unit tests for GNU/Linux with Python 3.11 and generate coverage report | |
if: matrix.os == 'ubuntu-latest' && matrix.python-version == 3.11 | |
run: python -m nox -s coverage | |
- name: Upload coverage report | |
if: matrix.os == 'ubuntu-latest' && matrix.python-version == 3.11 | |
uses: codecov/[email protected] | |
- name: Run integration tests | |
run: python -m nox -s integration | |
- name: Install docs dependencies and run doctests | |
if: matrix.os == 'ubuntu-latest' | |
run: python -m nox -s doctests | |
- name: Check if the documentation can be built | |
if: matrix.os == 'ubuntu-latest' | |
run: python -m nox -s docs | |
- name: Install dev dependencies and run example tests | |
if: matrix.os == 'ubuntu-latest' | |
run: python -m nox -s examples | |
- name: Run example scripts tests | |
if: matrix.os == 'ubuntu-latest' | |
run: python -m nox -s scripts | |
# M-series Mac Mini | |
build-apple-mseries: | |
if: github.repository_owner == 'pybamm-team' | |
needs: style | |
runs-on: [self-hosted, macOS, ARM64] | |
env: | |
GITHUB_PATH: ${PYENV_ROOT/bin:$PATH} | |
strategy: | |
fail-fast: false | |
matrix: | |
python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"] | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Install Python & create virtualenv | |
shell: bash | |
run: | | |
eval "$(pyenv init -)" | |
pyenv install ${{ matrix.python-version }} -s | |
pyenv virtualenv ${{ matrix.python-version }} pybamm-${{ matrix.python-version }} | |
- name: Install build-time dependencies & run unit tests for M-series macOS runner | |
shell: bash | |
run: | | |
eval "$(pyenv init -)" | |
pyenv activate pybamm-${{ matrix.python-version }} | |
python -m pip install --upgrade pip nox | |
python -m nox -s pybamm-requires | |
python -m nox -s unit | |
- name: Run integration tests for M-series macOS runner | |
run: | | |
eval "$(pyenv init -)" | |
pyenv activate pybamm-${{ matrix.python-version }} | |
python -m nox -s integration | |
- name: Uninstall pyenv-virtualenv & Python | |
if: always() | |
shell: bash | |
run: | | |
eval "$(pyenv init -)" | |
pyenv activate pybamm-${{ matrix.python-version }} | |
pyenv uninstall -f $( python --version ) | |
test_install_odes: | |
runs-on: ${{ matrix.os }} | |
strategy: | |
matrix: | |
os: [ubuntu-latest, macos-latest] | |
python-version: ["3.8", "3.9", "3.10", "3.11"] | |
fail-fast: false | |
name: Test pybamm_install_odes on ${{ matrix.os }} | |
steps: | |
- name: Check out PyBaMM repository | |
uses: actions/checkout@v4 | |
- name: Install Linux system dependencies | |
if: matrix.os == 'ubuntu-latest' | |
run: | | |
sudo apt-get update | |
sudo apt-get install gfortran gcc libopenblas-dev | |
- name: Install macOS system dependencies | |
if: matrix.os == 'macos-latest' | |
env: | |
# Homebrew environment variables | |
HOMEBREW_NO_INSTALL_CLEANUP: 1 | |
HOMEBREW_NO_AUTO_UPDATE: 1 | |
HOMEBREW_NO_COLOR: 1 | |
# Speed up CI | |
NONINTERACTIVE: 1 | |
run: | | |
brew analytics off | |
brew install openblas | |
brew reinstall gcc gfortran | |
- name: Set up Python ${{ matrix.python-version }} | |
id: setup-python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install PyBaMM | |
run: python -m pip install -e . | |
- name: Test pybamm_install_odes on ${{ matrix.os }} | |
run: | | |
python -m pip cache purge | |
python -m pip install wget cmake | |
pybamm_install_odes |