update docs

ptiede · Feb 21, 2024 · b79315d · b79315d
1 parent 5a5cd8d
commit b79315d
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Showing 3 changed files with 7 additions and 7 deletions.
diff --git a/docs/make.jl b/docs/make.jl
@@ -29,7 +29,7 @@ makedocs(;
              ComradeOptimization, ComradeAHMC,
              ComradeNested, ComradeDynesty,
              ComradeAdaptMCMC],
-    repo="https://github.com/ptiede/Comrade.jl/blob/{commit}{path}#{line}",
+    # repo="https://github.com/ptiede/Comrade.jl/blob/{commit}{path}#{line}",
     sitename="Comrade.jl",
     format = Documenter.HTML(;prettyurls=true),
     pages=Any[

diff --git a/examples/ClosureImaging/main.jl b/examples/ClosureImaging/main.jl
@@ -191,7 +191,7 @@ DisplayAs.Text(DisplayAs.PNG(fig)) #hide
 using ComradeAHMC
 using Zygote
 metric = DiagEuclideanMetric(ndim)
-chain = sample(post, AHMC(;metric, autodiff=Val(:Zygote)), 700; n_adapts=500);
+chain = sample(post, AHMC(;metric, autodiff=Val(:Zygote)), 700; n_adapts=500, progress=false);
 
 
 # !!! warning
@@ -212,16 +212,16 @@ simg = std(imgs)
 fig = CM.Figure(;resolution=(700, 700));
 CM.image(fig[1,1], mimg,
                    axis=(xreversed=true, aspect=1, title="Mean Image"),
-                   colormap=:afmhot)
+                   colormap=:afmhot);
 CM.image(fig[1,2], simg./(max.(mimg, 1e-5)),
                    axis=(xreversed=true, aspect=1, title="1/SNR",), colorrange=(0.0, 2.0),
-                   colormap=:afmhot)
+                   colormap=:afmhot);
 CM.image(fig[2,1], imgs[1],
                    axis=(xreversed=true, aspect=1,title="Draw 1"),
-                   colormap=:afmhot)
+                   colormap=:afmhot);
 CM.image(fig[2,2], imgs[end],
                    axis=(xreversed=true, aspect=1,title="Draw 2"),
-                   colormap=:afmhot)
+                   colormap=:afmhot);
 CM.hidedecorations!.(fig.content)
 DisplayAs.Text(DisplayAs.PNG(fig)) #hide
 

diff --git a/examples/HybridImaging/main.jl b/examples/HybridImaging/main.jl
@@ -274,7 +274,7 @@ CM.image(g, skymodel(post, xopt), axis=(aspect=1, xreversed=true, title="MAP"),
 # We will now move directly to sampling at this point.
 using ComradeAHMC
 metric = DiagEuclideanMetric(ndim)
-chain = sample(rng, post, AHMC(;metric, autodiff=Val(:Zygote)), 700; n_adapts=500, initial_params=xopt, progress=true);
+chain = sample(rng, post, AHMC(;metric, autodiff=Val(:Zygote)), 700; n_adapts=500, initial_params=xopt, progress=false);
 
 # We then remove the adaptation/warmup phase from our chain
 chain = chain[501:end]