topo: ignore gap link in apply_restraints_from_link()

project-gemmi · Aug 1, 2024 · f50df17 · f50df17
1 parent 0b21552
commit f50df17
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/src/topo.cpp b/src/topo.cpp
@@ -423,7 +423,7 @@ std::vector<Topo::Rule> Topo::apply_restraints(const Restraints& rt,
 }
 
 void Topo::apply_restraints_from_link(Link& link, const MonLib& monlib) {
-  if (link.link_id.empty())
+  if (link.link_id.empty() || link.link_id == "gap")
     return;
   const ChemLink* chem_link = monlib.get_link(link.link_id);
   if (!chem_link) {