address #56 and #70 #112

	name: Render quarto website

	on:
	push:
	branches: [ "main" ]
	pull_request:
	branches: [ "main" ]

	concurrency:
	group: ${{ github.workflow }}-${{ github.ref }}
	cancel-in-progress: true

	jobs:
	render_site:
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v3
	- uses: actions/setup-python@v4
	with:
	python-version: '3.10'
	- name: Install GDebi first
	run: sudo apt-get install gdebi-core
	- name: Download the deb file
	run: sudo curl -LO https://quarto.org/download/latest/quarto-linux-amd64.deb
	- name: Install the deb file
	run: sudo apt-get install -y ./quarto-linux-amd64.deb
	- name: Verify Install
	run: /usr/local/bin/quarto check
	- name: Install quarto deps
	run: pip install nbformat nbclient ipykernel jupyter tomli biopython scholarly crossrefapi toml pymongo orcid
	- name: Install academicdb
	run: pip install academicdb
	- name: decrypt config file
	run: ./decrypt_secret.sh
	continue-on-error: true
	env:
	CONFIG_SECRET_PASSPHRASE: ${{ secrets.CONFIG_SECRET_PASSPHRASE }}
	- name: decrypt pybliometrics config file
	run: ./decrypt_pyb_config.sh
	continue-on-error: true
	env:
	TOKEN_PASSCODE: ${{ secrets.TOKEN_PASSCODE }}
	- name: Allow Python code to fail on forked PRs
	run: \|
	if [ "$REPO_OWNER" != "poldracklab" ]; then
	echo "POLDRACKLAB_IGNORE_FAILURE=1" \| tee -a $GITHUB_ENV
	fi
	env:
	REPO_OWNER: ${{ github.event.pull_request.head.repo.owner.login }}
	- name: build site
	run: quarto render .
	- name: Deploy
	if: github.event_name == 'push'
	uses: JamesIves/github-pages-deploy-action@v4
	with:
	folder: docs # The folder the action should deploy.

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