We read every piece of feedback, and take your input very seriously.
To see all available qualifiers, see our documentation.
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
I noticed in the refactored hello looper examples that looper report seems to call pipestat summarize multiple times (seemingly once per sample):
looper report
(venv) drc@databio:~/GITHUB/hello_looper/hello_looper/pipestat_example$ looper report --portable Looper version: 2.0.0a1 Command: report Using looper config (.looper.yaml). Portable flag set: True Building index page for pipeline: count_lines Creating objects summary 'count_lines' pipeline stats summary (n=4): /home/drc/GITHUB/hello_looper/hello_looper/pipestat_example/./results/count_lines_stats_summary.tsv 'count_lines' pipeline objects summary (n=0): /home/drc/GITHUB/hello_looper/hello_looper/pipestat_example/./results/count_lines_objs_summary.yaml * Creating sample pages * Creating object pages Report zip file successfully created: /home/drc/GITHUB/hello_looper/hello_looper/pipestat_example/./results/portable_reports/count_lines_report_portable Report directory: /home/drc/GITHUB/hello_looper/hello_looper/pipestat_example/./results/portable_reports/count_lines/index.html Portable flag set: True Building index page for pipeline: count_lines Creating objects summary 'count_lines' pipeline stats summary (n=4): /home/drc/GITHUB/hello_looper/hello_looper/pipestat_example/./results/count_lines_stats_summary.tsv 'count_lines' pipeline objects summary (n=0): /home/drc/GITHUB/hello_looper/hello_looper/pipestat_example/./results/count_lines_objs_summary.yaml * Creating sample pages * Creating object pages Report zip file successfully created: /home/drc/GITHUB/hello_looper/hello_looper/pipestat_example/./results/portable_reports/count_lines_report_portable Report directory: /home/drc/GITHUB/hello_looper/hello_looper/pipestat_example/./results/portable_reports/count_lines/index.html Portable flag set: True Building index page for pipeline: count_lines Creating objects summary 'count_lines' pipeline stats summary (n=4): /home/drc/GITHUB/hello_looper/hello_looper/pipestat_example/./results/count_lines_stats_summary.tsv 'count_lines' pipeline objects summary (n=0): /home/drc/GITHUB/hello_looper/hello_looper/pipestat_example/./results/count_lines_objs_summary.yaml * Creating sample pages * Creating object pages Report zip file successfully created: /home/drc/GITHUB/hello_looper/hello_looper/pipestat_example/./results/portable_reports/count_lines_report_portable Report directory: /home/drc/GITHUB/hello_looper/hello_looper/pipestat_example/./results/portable_reports/count_lines/index.html
It should be iterating over each pipeline interface.
The text was updated successfully, but these errors were encountered:
No branches or pull requests
I noticed in the refactored hello looper examples that
looper report
seems to call pipestat summarize multiple times (seemingly once per sample):It should be iterating over each pipeline interface.
The text was updated successfully, but these errors were encountered: