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pcdshub · Aug 26, 2024 · b4caa47 · b4caa47
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diff --git a/master/.buildinfo b/master/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: 4425060f6718333fb04bed90dae4b8d7
+config: 2518c82fc4e1dfc1399c52fcfe776bba
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/master/_modules/atef/check.html b/master/_modules/atef/check.html
@@ -6,7 +6,7 @@
   <title>atef.check &mdash; atef  documentation</title>
       <link rel="stylesheet" type="text/css" href="../../_static/pygments.css?v=fa44fd50" />
       <link rel="stylesheet" type="text/css" href="../../_static/css/theme.css?v=19f00094" />
-      <link rel="stylesheet" type="text/css" href="../../_static/graphviz.css?v=eafc0fe6" />
+      <link rel="stylesheet" type="text/css" href="../../_static/graphviz.css?v=fd3f3429" />
 
 
   <!--[if lt IE 9]>
@@ -16,7 +16,7 @@
         <script src="../../_static/jquery.js?v=5d32c60e"></script>
         <script src="../../_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
         <script src="../../_static/documentation_options.js?v=5929fcd5"></script>
-        <script src="../../_static/doctools.js?v=888ff710"></script>
+        <script src="../../_static/doctools.js?v=9a2dae69"></script>
         <script src="../../_static/sphinx_highlight.js?v=dc90522c"></script>
         <script src="../../_static/docs-versions-menu.js?v=3d6a1aea"></script>
     <script src="../../_static/js/theme.js"></script>

diff --git a/master/_modules/atef/config.html b/master/_modules/atef/config.html
diff --git a/master/_modules/atef/procedure.html b/master/_modules/atef/procedure.html
diff --git a/master/_modules/atef/tools.html b/master/_modules/atef/tools.html
@@ -6,7 +6,7 @@
   <title>atef.tools &mdash; atef  documentation</title>
       <link rel="stylesheet" type="text/css" href="../../_static/pygments.css?v=fa44fd50" />
       <link rel="stylesheet" type="text/css" href="../../_static/css/theme.css?v=19f00094" />
-      <link rel="stylesheet" type="text/css" href="../../_static/graphviz.css?v=eafc0fe6" />
+      <link rel="stylesheet" type="text/css" href="../../_static/graphviz.css?v=fd3f3429" />
 
 
   <!--[if lt IE 9]>
@@ -16,7 +16,7 @@
         <script src="../../_static/jquery.js?v=5d32c60e"></script>
         <script src="../../_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
         <script src="../../_static/documentation_options.js?v=5929fcd5"></script>
-        <script src="../../_static/doctools.js?v=888ff710"></script>
+        <script src="../../_static/doctools.js?v=9a2dae69"></script>
         <script src="../../_static/sphinx_highlight.js?v=dc90522c"></script>
         <script src="../../_static/docs-versions-menu.js?v=3d6a1aea"></script>
     <script src="../../_static/js/theme.js"></script>

diff --git a/master/_modules/atef/walk.html b/master/_modules/atef/walk.html
@@ -6,7 +6,7 @@
   <title>atef.walk &mdash; atef  documentation</title>
       <link rel="stylesheet" type="text/css" href="../../_static/pygments.css?v=fa44fd50" />
       <link rel="stylesheet" type="text/css" href="../../_static/css/theme.css?v=19f00094" />
-      <link rel="stylesheet" type="text/css" href="../../_static/graphviz.css?v=eafc0fe6" />
+      <link rel="stylesheet" type="text/css" href="../../_static/graphviz.css?v=fd3f3429" />
 
 
   <!--[if lt IE 9]>
@@ -16,7 +16,7 @@
         <script src="../../_static/jquery.js?v=5d32c60e"></script>
         <script src="../../_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
         <script src="../../_static/documentation_options.js?v=5929fcd5"></script>
-        <script src="../../_static/doctools.js?v=888ff710"></script>
+        <script src="../../_static/doctools.js?v=9a2dae69"></script>
         <script src="../../_static/sphinx_highlight.js?v=dc90522c"></script>
         <script src="../../_static/docs-versions-menu.js?v=3d6a1aea"></script>
     <script src="../../_static/js/theme.js"></script>

diff --git a/master/_modules/index.html b/master/_modules/index.html
@@ -6,7 +6,7 @@
   <title>Overview: module code &mdash; atef  documentation</title>
       <link rel="stylesheet" type="text/css" href="../_static/pygments.css?v=fa44fd50" />
       <link rel="stylesheet" type="text/css" href="../_static/css/theme.css?v=19f00094" />
-      <link rel="stylesheet" type="text/css" href="../_static/graphviz.css?v=eafc0fe6" />
+      <link rel="stylesheet" type="text/css" href="../_static/graphviz.css?v=fd3f3429" />
 
 
   <!--[if lt IE 9]>
@@ -16,7 +16,7 @@
         <script src="../_static/jquery.js?v=5d32c60e"></script>
         <script src="../_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
         <script src="../_static/documentation_options.js?v=5929fcd5"></script>
-        <script src="../_static/doctools.js?v=888ff710"></script>
+        <script src="../_static/doctools.js?v=9a2dae69"></script>
         <script src="../_static/sphinx_highlight.js?v=dc90522c"></script>
         <script src="../_static/docs-versions-menu.js?v=3d6a1aea"></script>
     <script src="../_static/js/theme.js"></script>

diff --git a/master/_sources/generated/atef.config.rst.txt b/master/_sources/generated/atef.config.rst.txt
@@ -35,8 +35,10 @@
       PreparedGroup
       PreparedPVConfiguration
       PreparedSignalComparison
+      PreparedTemplateConfiguration
       PreparedToolComparison
       PreparedToolConfiguration
+      TemplateConfiguration
       ToolConfiguration
 
 

diff --git a/master/_sources/generated/atef.procedure.rst.txt b/master/_sources/generated/atef.procedure.rst.txt
@@ -44,13 +44,15 @@
       PreparedProcedureGroup
       PreparedProcedureStep
       PreparedSetValueStep
+      PreparedTemplateStep
       PreparedValueToSignal
       ProcedureFile
       ProcedureGroup
       ProcedureStep
       PydmDisplayStep
       SetValueStep
       Target
+      TemplateStep
       TyphosDisplayStep
       ValueToTarget
 

diff --git a/master/_sources/generated/generated/atef.config.ConfigurationFile.rst.txt b/master/_sources/generated/generated/atef.config.ConfigurationFile.rst.txt
@@ -20,6 +20,7 @@ atef.config.ConfigurationFile
     .. automethod:: get_by_tag
     .. automethod:: to_json
     .. automethod:: to_yaml
+    .. automethod:: validate
     .. automethod:: walk_configs
 
 

diff --git a/.../_sources/generated/generated/atef.config.PreparedTemplateConfiguration.rst.txt b/.../_sources/generated/generated/atef.config.PreparedTemplateConfiguration.rst.txt
@@ -0,0 +1,34 @@
+atef.config.PreparedTemplateConfiguration
+=========================================
+
+.. currentmodule:: atef.config
+
+.. autoclass:: PreparedTemplateConfiguration
+
+
+
+    .. rubric:: Methods
+
+
+    .. automethod:: __init__
+    .. automethod:: compare
+    .. automethod:: from_config
+    .. automethod:: walk_comparisons
+
+
+
+
+
+    .. rubric:: Attributes
+
+
+    .. autoattribute:: parent
+    .. autoattribute:: result
+    .. autoattribute:: config
+    .. autoattribute:: file
+    .. autoattribute:: cache
+    .. autoattribute:: comparisons
+    .. autoattribute:: prepare_failures
+    .. autoattribute:: combined_result
+
+
diff --git a/master/_sources/generated/generated/atef.config.TemplateConfiguration.rst.txt b/master/_sources/generated/generated/atef.config.TemplateConfiguration.rst.txt
@@ -0,0 +1,31 @@
+atef.config.TemplateConfiguration
+=================================
+
+.. currentmodule:: atef.config
+
+.. autoclass:: TemplateConfiguration
+
+
+
+    .. rubric:: Methods
+
+
+    .. automethod:: __init__
+    .. automethod:: children
+    .. automethod:: move_comparison
+    .. automethod:: replace_comparison
+
+
+
+
+
+    .. rubric:: Attributes
+
+
+    .. autoattribute:: description
+    .. autoattribute:: filename
+    .. autoattribute:: name
+    .. autoattribute:: tags
+    .. autoattribute:: edits
+
+
diff --git a/master/_sources/generated/generated/atef.procedure.PreparedTemplateStep.rst.txt b/master/_sources/generated/generated/atef.procedure.PreparedTemplateStep.rst.txt
@@ -0,0 +1,33 @@
+atef.procedure.PreparedTemplateStep
+===================================
+
+.. currentmodule:: atef.procedure
+
+.. autoclass:: PreparedTemplateStep
+
+
+
+    .. rubric:: Methods
+
+
+    .. automethod:: __init__
+    .. automethod:: from_origin
+    .. automethod:: run
+
+
+
+
+
+    .. rubric:: Attributes
+
+
+    .. autoattribute:: name
+    .. autoattribute:: parent
+    .. autoattribute:: result
+    .. autoattribute:: origin
+    .. autoattribute:: file
+    .. autoattribute:: combined_result
+    .. autoattribute:: verify_result
+    .. autoattribute:: step_result
+
+
diff --git a/master/_sources/generated/generated/atef.procedure.ProcedureFile.rst.txt b/master/_sources/generated/generated/atef.procedure.ProcedureFile.rst.txt
@@ -17,6 +17,7 @@ atef.procedure.ProcedureFile
     .. automethod:: from_yaml
     .. automethod:: to_json
     .. automethod:: to_yaml
+    .. automethod:: validate
     .. automethod:: walk_steps
 
 

diff --git a/master/_sources/generated/generated/atef.procedure.TemplateStep.rst.txt b/master/_sources/generated/generated/atef.procedure.TemplateStep.rst.txt
@@ -0,0 +1,32 @@
+atef.procedure.TemplateStep
+===========================
+
+.. currentmodule:: atef.procedure
+
+.. autoclass:: TemplateStep
+
+
+
+    .. rubric:: Methods
+
+
+    .. automethod:: __init__
+    .. automethod:: allow_verify
+    .. automethod:: children
+
+
+
+
+
+    .. rubric:: Attributes
+
+
+    .. autoattribute:: description
+    .. autoattribute:: filename
+    .. autoattribute:: name
+    .. autoattribute:: parent
+    .. autoattribute:: step_success_required
+    .. autoattribute:: verify_required
+    .. autoattribute:: edits
+
+
diff --git a/master/_sources/releases.rst.txt b/master/_sources/releases.rst.txt
@@ -2,6 +2,33 @@ Release History
 ###############
 
 
+v1.5.0 (2024-08-20)
+===================
+
+Features
+--------
+- Adds report output option to `atef check` cli tool
+- Adds template step active and passive dataclasses, along with report support.
+- Adds RegexFindReplace for serializable, regex specific FindReplaceAction
+- Adds atef config GUI pages for passive and active templated checkouts
+  featuring a clear staging area and tree-view for added clarity
+
+Bugfixes
+--------
+- Unifies usage of ``create_tree_from_file``
+
+Maintenance
+-----------
+- Pins numpy<2.0 to avoid issues with upstream incompatibilities
+- Refactors find-replace logic and dataclasses into a separate module from the widgets that display them
+- Specify bluesky-base and pin matplotlib in conda dependencies to avoid unintended qt6 dependencies
+
+Contributors
+------------
+- tangkong
+
+
+
 v1.4.0 (2024-02-20)
 ===================
 

diff --git a/master/_static/basic.css b/master/_static/basic.css
@@ -4,7 +4,7 @@
  *
  * Sphinx stylesheet -- basic theme.
  *
- * :copyright: Copyright 2007-2023 by the Sphinx team, see AUTHORS.
+ * :copyright: Copyright 2007-2024 by the Sphinx team, see AUTHORS.
  * :license: BSD, see LICENSE for details.
  *
  */

diff --git a/master/_static/doctools.js b/master/_static/doctools.js
@@ -4,7 +4,7 @@
  *
  * Base JavaScript utilities for all Sphinx HTML documentation.
  *
- * :copyright: Copyright 2007-2023 by the Sphinx team, see AUTHORS.
+ * :copyright: Copyright 2007-2024 by the Sphinx team, see AUTHORS.
  * :license: BSD, see LICENSE for details.
  *
  */

diff --git a/master/_static/graphviz.css b/master/_static/graphviz.css
@@ -4,7 +4,7 @@
  *
  * Sphinx stylesheet -- graphviz extension.
  *
- * :copyright: Copyright 2007-2023 by the Sphinx team, see AUTHORS.
+ * :copyright: Copyright 2007-2024 by the Sphinx team, see AUTHORS.
  * :license: BSD, see LICENSE for details.
  *
  */

diff --git a/master/_static/language_data.js b/master/_static/language_data.js
@@ -5,15 +5,15 @@
  * This script contains the language-specific data used by searchtools.js,
  * namely the list of stopwords, stemmer, scorer and splitter.
  *
- * :copyright: Copyright 2007-2023 by the Sphinx team, see AUTHORS.
+ * :copyright: Copyright 2007-2024 by the Sphinx team, see AUTHORS.
  * :license: BSD, see LICENSE for details.
  *
  */
 
 var stopwords = ["a", "and", "are", "as", "at", "be", "but", "by", "for", "if", "in", "into", "is", "it", "near", "no", "not", "of", "on", "or", "such", "that", "the", "their", "then", "there", "these", "they", "this", "to", "was", "will", "with"];
 
 
-/* Non-minified version is copied as a separate JS file, is available */
+/* Non-minified version is copied as a separate JS file, if available */
 
 /**
  * Porter Stemmer