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changed to PythonPavkage easyblock
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pavelToman committed Feb 2, 2024
1 parent 71f8671 commit 1dfbf8e
Showing 1 changed file with 13 additions and 20 deletions.
33 changes: 13 additions & 20 deletions easybuild/easyconfigs/p/phyluce/phyluce-1.7.3-foss-2023a.eb
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
easyblock = 'PythonBundle'
easyblock = 'PythonPackage'

name = 'phyluce'
version = '1.7.3'
Expand All @@ -15,6 +15,18 @@ phyluce is a software package for working with data generated from sequence capt

toolchain = {'name': 'foss', 'version': '2023a'}

source_urls = ['https://github.com/faircloth-lab/phyluce/archive/refs/tags/']
sources = ['v%(version)s.tar.gz']
patches = [
'%(name)s-%(version)s_fix-config-paths.patch',
'%(name)s-%(version)s_removal-Bio-Alphabet.patch',
]
checksums = [
{'v1.7.3.tar.gz': '931fd512730bb101266b27728576df00277858d256e1ab30d64b474588362e11'},
{'phyluce-1.7.3_fix-config-paths.patch': '543daee90e1422a7a43c304d6f33e5f16411cc7b85c522b847388feff8cc402a'},
{'phyluce-1.7.3_removal-Bio-Alphabet.patch': 'f6c5237552fde5a3bf24105781a9001ee5e87bbd825015fc1aa6b5c6a147e171'},
]

dependencies = [
('Python', '3.11.3'),
('Biopython', '1.83'),
Expand All @@ -40,25 +52,6 @@ dependencies = [
]

use_pip = True

exts_list = [
(name, version, {
'patches': [
'%(name)s-%(version)s_fix-config-paths.patch',
'%(name)s-%(version)s_removal-Bio-Alphabet.patch',
],
'source_urls': ['https://github.com/faircloth-lab/phyluce/archive/refs/tags/'],
'sources': 'v%(version)s.tar.gz',
'checksums': [
{'v1.7.3.tar.gz': '931fd512730bb101266b27728576df00277858d256e1ab30d64b474588362e11'},
{'phyluce-1.7.3_fix-config-paths.patch':
'543daee90e1422a7a43c304d6f33e5f16411cc7b85c522b847388feff8cc402a'},
{'phyluce-1.7.3_removal-Bio-Alphabet.patch':
'f6c5237552fde5a3bf24105781a9001ee5e87bbd825015fc1aa6b5c6a147e171'},
],
}),
]

sanity_pip_check = True

sanity_check_paths = {
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