Update W49, W50, W55 #74

	name: Run-Data-Pipeline

	on:
	push:
	branches-ignore:
	- "master"

	jobs:
	run-pipeline:
	runs-on: ubuntu-latest

	steps:
	- uses: actions/checkout@v3
	- name: Install data pipeline
	run: \|
	sudo apt install python3.10
	python3.10 -m pip install setuptools
	python3.10 -m pip install git+https://github.com/ddionrails/paneldata_pipeline@master#egg=paneldata_pipeline
	- name: Process Data
	run: \|
	python3.10 -m paneldata_pipeline -i metadata/ -o ddionrails/ -s gip -w ${{ secrets.study_version }} -u
	- name: Install data compliance check
	run: \|
	python3 -m pip install setuptools
	python3 -m pip install goodtables
	- name: Test Structure
	run: \|
	python3 -m goodtables validate --skip-checks extra-header ddionrails/datapackage.json
	- name: Update file and push to remote
	run: \|
	echo "Stage new files."
	(IFS=$'\n'
	for file in $(git ls-files --others --exclude-standard)
	do
	git add $file
	echo "Staging " $file
	done)
	echo "Stage changed files."
	(IFS=$'\n'
	for file in $(git diff-index --name-only HEAD)
	do
	git add $file
	echo "Staging " $file
	done)
	CHANGES_TO_COMMIT=$(git diff --name-only --cached \| wc -w)
	if [ "$CHANGES_TO_COMMIT" -gt 0 ]
	then
	echo "Commit changes."
	git config --global user.name "GitHub Action"
	git config --global user.email "[email protected]"

	git commit -m "Update generated data with data-pipeline"
	git push
	else
	echo "No changes to commit."
	exit 0
	fi

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