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    • qiime2.org source
      JavaScript
      2000Updated Dec 5, 2024Dec 5, 2024
    • library

      Public
      A website for sharing QIIME 2 Plugins
      Svelte
      BSD 3-Clause "New" or "Revised" License
      1030Updated Dec 5, 2024Dec 5, 2024
    • q2-vizard

      Public
      The first choice of wizard lizards for interactive, generalized microbiome data visualization!
      Python
      BSD 3-Clause "New" or "Revised" License
      9163Updated Dec 5, 2024Dec 5, 2024
    • Makefile
      BSD 3-Clause "New" or "Revised" License
      5151Updated Dec 4, 2024Dec 4, 2024
    • qiime2

      Public
      Official repository for the QIIME 2 framework.
      Python
      BSD 3-Clause "New" or "Revised" License
      2414776413Updated Dec 3, 2024Dec 3, 2024
    • q2-fmt

      Public
      q2-fmt is an all-in-one suite for assessing engraftment extent following Fecal Microbiota Transplants!
      Python
      BSD 3-Clause "New" or "Revised" License
      11472Updated Nov 26, 2024Nov 26, 2024
    • data302

      Public
      Python
      BSD 3-Clause "New" or "Revised" License
      10010Updated Nov 22, 2024Nov 22, 2024
    • Python
      BSD 3-Clause "New" or "Revised" License
      5001Updated Nov 20, 2024Nov 20, 2024
    • q2view

      Public
      A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations
      TypeScript
      BSD 3-Clause "New" or "Revised" License
      1030Updated Nov 4, 2024Nov 4, 2024
    • docs

      Public
      Python
      BSD 3-Clause "New" or "Revised" License
      5821311Updated Oct 30, 2024Oct 30, 2024
    • Official QIIME 2 tools for Galaxy
      Python
      BSD 3-Clause "New" or "Revised" License
      5183Updated Oct 30, 2024Oct 30, 2024
    • q2cli

      Public
      Command line interface for QIIME 2
      Python
      BSD 3-Clause "New" or "Revised" License
      2419130Updated Oct 25, 2024Oct 25, 2024
    • Stores a list of the repos that are included in the QIIME 2 library
      BSD 3-Clause "New" or "Revised" License
      3001Updated Oct 24, 2024Oct 24, 2024
    • HTML
      BSD 3-Clause "New" or "Revised" License
      3000Updated Oct 24, 2024Oct 24, 2024
    • q2-stats

      Public
      Python
      BSD 3-Clause "New" or "Revised" License
      7120Updated Oct 24, 2024Oct 24, 2024
    • Python
      BSD 3-Clause "New" or "Revised" License
      28571Updated Oct 23, 2024Oct 23, 2024
    • Python
      BSD 3-Clause "New" or "Revised" License
      18340Updated Oct 23, 2024Oct 23, 2024
    • q2galaxy

      Public
      Generate Galaxy tool descriptions automatically from QIIME 2 actions.
      Python
      BSD 3-Clause "New" or "Revised" License
      1819110Updated Oct 23, 2024Oct 23, 2024
    • vsearch plugin for QIIME 2
      Python
      BSD 3-Clause "New" or "Revised" License
      206101Updated Oct 23, 2024Oct 23, 2024
    • q2-types

      Public
      Python
      BSD 3-Clause "New" or "Revised" License
      4117261Updated Oct 23, 2024Oct 23, 2024
    • q2-taxa

      Public
      Python
      BSD 3-Clause "New" or "Revised" License
      293430Updated Oct 23, 2024Oct 23, 2024
    • QIIME 2 plugin for machine learning prediction of sample data.
      Python
      BSD 3-Clause "New" or "Revised" License
      366150Updated Oct 23, 2024Oct 23, 2024
    • Quality filtering for QIIME2
      Python
      BSD 3-Clause "New" or "Revised" License
      16140Updated Oct 23, 2024Oct 23, 2024
    • A QIIME 2 plugin for quality control of sequence and feature data
      Python
      BSD 3-Clause "New" or "Revised" License
      17490Updated Oct 23, 2024Oct 23, 2024
    • Phylogenetic reconstruction, and operations on phylogenetic trees.
      Python
      BSD 3-Clause "New" or "Revised" License
      19420Updated Oct 23, 2024Oct 23, 2024
    • This plugin exists to define integration tests between interfaces and the framework.
      Python
      BSD 3-Clause "New" or "Revised" License
      6000Updated Oct 23, 2024Oct 23, 2024
    • Python
      BSD 3-Clause "New" or "Revised" License
      17360Updated Oct 23, 2024Oct 23, 2024
    • QIIME 2 plugin for paired sample comparisons
      Python
      BSD 3-Clause "New" or "Revised" License
      189301Updated Oct 23, 2024Oct 23, 2024
    • Python
      BSD 3-Clause "New" or "Revised" License
      1713100Updated Oct 23, 2024Oct 23, 2024
    • QIIME 2 plugin supporting operations on feature tables.
      Python
      BSD 3-Clause "New" or "Revised" License
      372264Updated Oct 23, 2024Oct 23, 2024