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    14 repositories

    • ci-gwas

      Public
      Causal inference for multiple risk factors and diseases from genomics data
      C++
      •
      MIT License
      •0•2•0•1•Updated Dec 18, 2024Dec 18, 2024

    • sgVAMP-py

      Public
      Python implementation of gVAMP for summary statistics.
      Python
      •0•0•0•1•Updated Oct 14, 2024Oct 14, 2024

    • gVAMP

      Public
      Vector Approximate Message Passing inference framework for GWAS
      C++
      •
      MIT License
      •4•14•2•1•Updated Oct 14, 2024Oct 14, 2024

    • MAJA

      Public
      Python
      •0•0•0•0•Updated Sep 13, 2024Sep 13, 2024

    • gmrm-omi

      Public
      Bayesian grouped mixture of regressions model for analysing omics data
      C++
      •0•0•0•0•Updated Jul 2, 2024Jul 2, 2024

    • VAMPomi

      Public
      gVAMPomi is Vector Approximate Message Passing method for analyzing omics data
      C++
      •0•0•0•0•Updated May 10, 2024May 10, 2024

    • familyMC

      Public
      Simulating families under random and assortative mating
      Python
      •1•0•0•0•Updated May 10, 2024May 10, 2024

    • gmrm

      Public
      A Bayesian grouped mixture of regressions model capable of estimating SNP marker effect sizes for multiple outcomes simultaneously
      gwasregression-modelsbayesian-statisticsgwas-tools
      C++
      •
      MIT License
      •1•9•1•0•Updated Oct 11, 2023Oct 11, 2023

    • pred_limits

      Public
      Fundamental limits of genetic effects inference in Bayesian regression setting
      0•0•0•0•Updated May 23, 2023May 23, 2023

    • rs-bann

      Public
      Biologically annotated Bayesian Neural Network implementation in Rust
      Rust
      •0•0•0•0•Updated May 10, 2023May 10, 2023

    • readf32-py-howto

      Public
      Short tutorial on how to read a float32 binary matrix from file in python
      Python
      •0•0•0•0•Updated Mar 16, 2023Mar 16, 2023

    • hydra

      Public
      Software for performing Bayesian penalized regression for complex trait analysis using hybrid-parallel algorithms.
      C++
      •
      MIT License
      •1•7•10•0•Updated Jan 7, 2022Jan 7, 2022

    • BayesRRcpp

      Public
      C++ implementation of BayesR using Eigen
      C++
      •
      MIT License
      •0•1•0•0•Updated Mar 31, 2021Mar 31, 2021

    • data-analysis

      Public
      HTML
      •
      MIT License
      •0•2•0•0•Updated Sep 22, 2020Sep 22, 2020