CNApy organization

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7 repositories

CNApy
Public
An integrated visual environment for metabolic modeling with common methods such as FBA, FVA and Elementary Flux Modes, and advanced features such as thermodynamic methods, extended Minimal Cut Sets, OptKnock, RobustKnock, OptCouple and more!
bioinformatics systems-biology computational-biology constraint-programming cobra metabolic-models sbml flux-balance-analysis metabolic-reconstruction constraint-based-modeling
Python
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Apache License 2.0
•7•46•15•0•Updated Nov 20, 2024Nov 20, 2024
optlang_enumerator
Public
computational-biology constraint-based-modeling metabolic-engineering bioinformatics-algorithms stoichiometric-modeling python
Python
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Apache License 2.0
•1•3•0•0•Updated Oct 18, 2024Oct 18, 2024
CNApy-guide
Public
📕 CNApy Guide
manual constraint-programming metabolic-models
HTML
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Other
•0•3•0•0•Updated Oct 8, 2024Oct 8, 2024
efmtool_link
Public
bioinformatics computational-biology constraint-based-modeling metabolic-pathways stoichiometric-modeling python
Python
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Apache License 2.0
•0•0•0•0•Updated Sep 26, 2024Sep 26, 2024
CNApy-installer
Public
Python
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Apache License 2.0
•0•0•0•0•Updated Sep 25, 2024Sep 25, 2024
cnapy-conda-forge
Public
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
Python
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BSD 3-Clause "New" or "Revised" License
•5k•0•0•0•Updated Aug 27, 2024Aug 27, 2024
CNApy-projects
Public
🗺️ A repository of CNApy projects
metabolic-models metabolic-network computational-biology-datasets stoichiometric-modeling
Tcl
•1•6•0•0•Updated May 10, 2024May 10, 2024