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    23 repositories

    • dorieh

      Public
      Data platform for population and environmental health
      Python
      •
      Apache License 2.0
      •1•0•0•0•Updated Nov 19, 2024Nov 19, 2024

    • anfisa

      Public
      Variant Analysis and Curation Tool (Back-end, REST API and Internal Client)
      Python
      •
      Apache License 2.0
      •13•6•0•4•Updated Oct 15, 2024Oct 15, 2024

    • deploy

      Public
      Mustache
      •0•0•1•0•Updated Jun 6, 2024Jun 6, 2024

    • Anfisa-Annotations

      Public
      Anfisa Genomic Annotations. Collection of annotation utilities and services
      Java
      •
      Apache License 2.0
      •3•0•0•0•Updated Sep 12, 2023Sep 12, 2023

    • .github

      Public
      0•0•0•0•Updated May 18, 2023May 18, 2023

    • oc-iac

      Public
      Infrastructure as code for forome-dev-stands
      Mustache
      •0•1•0•0•Updated May 18, 2023May 18, 2023

    • Anfisa-Front-End

      Public
      Web client for Anfisa Variant Curation Tool
      Vue
      •
      Apache License 2.0
      •3•2•0•25•Updated Jan 4, 2023Jan 4, 2023

    • documentation

      Public
      0•0•0•0•Updated Dec 17, 2022Dec 17, 2022

    • Anfisa-React-Client

      Public
      TypeScript
      •
      Apache License 2.0
      •3•0•0•1•Updated Oct 20, 2022Oct 20, 2022

    • Anfisa-CLI

      Public
      Command Line Interface for Anfisa Backend
      Java
      •
      Apache License 2.0
      •0•0•0•1•Updated Oct 20, 2022Oct 20, 2022

    • annotation-deploy

      Public
      Deploy annotation service
      HCL
      •2•0•0•0•Updated Aug 10, 2022Aug 10, 2022

    • anfisa-openshift

      Public
      Deploy Anfisa to OpenShift in IBM-cloud
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Jul 20, 2022Jul 20, 2022

    • vcf-upload-cwl-pipeline

      Public
      VCF upload cwl pipeline is used to automatic VEP and Java annotations and upload an annotated dataset to Anfisa
      Common Workflow Language
      •1•0•0•1•Updated Jun 22, 2022Jun 22, 2022

    • forome_misc_tools

      Public
      Miscellaneous tools used in Forome Platform
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Jun 15, 2022Jun 15, 2022

    • airflow-cwl-docker

      Public
      Infrastructure as a code for reproducible data science pipelines using CWL and Airflow
      airflowreproducible-researchdatasciencecwl-workflow
      Shell
      •
      Apache License 2.0
      •0•2•0•1•Updated Apr 14, 2022Apr 14, 2022

    • astorage

      Public
      Java
      •
      Apache License 2.0
      •0•0•0•0•Updated Apr 11, 2022Apr 11, 2022

    • rdao

      Public
      Java
      •
      Apache License 2.0
      •2•0•0•0•Updated Apr 11, 2022Apr 11, 2022

    • querypool-rdao

      Public
      Java
      •
      Apache License 2.0
      •1•0•0•0•Updated Apr 11, 2022Apr 11, 2022

    • airflow-cwl-openshift

      Public
      0•0•0•0•Updated Jan 27, 2022Jan 27, 2022

    • ForomePlatform.github.io

      Public
      Forome Open Genomics Platform site
      HTML
      •0•0•0•0•Updated Sep 7, 2020Sep 7, 2020

    • variant_callers

      Public
      Collection of variant callers based on BGM AB (allele balance) and bayesian callers.
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Mar 15, 2020Mar 15, 2020

    • pipeline

      Public
      Pipeline Workflows
      WDL
      •
      Apache License 2.0
      •3•3•0•0•Updated Oct 20, 2019Oct 20, 2019

    • claudia

      Public
      Text Analytics and NLP Workflows
      Python
      •0•0•0•0•Updated Feb 26, 2019Feb 26, 2019