Fix GHA: PG admin tools have moved #3895

Workflow file for this run

	# yamllint disable-file
	name: Run Code Checks

	on:
	pull_request:
	push:
	# Only run on push to `develop` branch to prevent double execution of
	# all the code checks.
	# Everything should be merged through PRs anyway.
	branches:
	- develop
	- test-ci-*
	- pypi/publish
	paths:
	- "**"
	- "!notebooks/**"
	- "!docs/**"
	- "!old/**"
	- "!README.md"

	jobs:
	build-wheels:
	runs-on: ubuntu-latest

	steps:
	- uses: actions/checkout@v4

	- name: Setup Python
	uses: actions/setup-python@v5
	with:
	python-version: 3.12

	- uses: actions/cache@v4
	id: wheels_cache
	with:
	path: ./wheels
	key: wheels-${{ github.sha }}

	- name: Install Dependencies
	run: \|
	python -m pip install --upgrade pip
	python -m pip install --upgrade setuptools
	python -m pip install --upgrade \
	toml \
	wheel \
	packaging \
	twine
	python -m pip freeze

	- name: Build Clean Packages
	run: \|
	mkdir -p ./wheels/clean
	./scripts/build-wheels.sh ./wheels/clean
	find ./wheels/clean -type f

	- name: Patch Package Versions
	run: \|
	grep -R --files-with-matches --include '*.py' '__version__ =' \
	\| xargs python ./scripts/patch_version.py ${GITHUB_RUN_NUMBER:-0}

	- name: Build Dev Packages
	run: \|
	mkdir -p ./wheels/dev
	./scripts/build-wheels.sh ./wheels/dev
	find ./wheels/dev -type f

	build-test-env-base:
	runs-on: ubuntu-latest

	steps:
	- uses: actions/checkout@v4

	- uses: actions/cache@v4
	id: conda_cache
	with:
	path: \|
	tests/env
	key: ${{ runner.os }}-test-env-${{ hashFiles('tests/test-env.yml') }}

	- uses: conda-incubator/setup-miniconda@v3
	if: steps.conda_cache.outputs.cache-hit != 'true'
	with:
	channels: conda-forge,defaults
	channel-priority: true
	activate-environment: ""
	mamba-version: "*"
	use-mamba: true

	- name: Dump Conda Environment Info
	shell: bash -l {0}
	if: steps.conda_cache.outputs.cache-hit != 'true'
	run: \|
	conda info
	conda list
	mamba -V
	conda config --show-sources
	conda config --show
	printenv \| sort

	- name: Build Python Environment for Testing
	shell: bash -l {0}
	if: steps.conda_cache.outputs.cache-hit != 'true'
	run: \|
	mamba env create -f tests/test-env.yml -p tests/env

	- name: Check Python Env
	shell: bash -l {0}
	if: steps.conda_cache.outputs.cache-hit != 'true'
	run: \|
	mamba env export -p tests/env

	test-with-coverage:
	runs-on: ubuntu-latest

	needs:
	- build-test-env-base
	services:
	# Label used to access the service container
	postgres:
	# Docker Hub image
	image: postgres
	# Provide the password for postgres
	env:
	POSTGRES_PASSWORD: postgres
	POSTGRES_DB: datacube
	# Set health checks to wait until postgres has started
	options: >-
	--health-cmd pg_isready
	--health-interval 10s
	--health-timeout 5s
	--health-retries 5
	ports:
	# Maps tcp port 5432 on service container to the host
	- 5432:5432
	steps:
	- uses: actions/checkout@v4

	- name: Get Conda Environment from Cache
	uses: actions/cache@v4
	id: conda_cache
	with:
	path: \|
	tests/env
	key: ${{ runner.os }}-test-env-${{ hashFiles('tests/test-env.yml') }}

	- name: Update PATH
	shell: bash
	run: \|
	echo "$(pwd)/tests/env/bin" >> $GITHUB_PATH
	export PATH="$(pwd)/tests/env/bin"

	- name: Install in Edit mode
	shell: bash
	run: \|
	which python
	which datacube

	./scripts/dev-install.sh --no-deps
	- name: Setup Test DB
	shell: bash
	run: \|
	echo "Launching test db"
	datacube system init
	pip list --format=freeze

	env:
	DATACUBE_DB_URL: postgresql://postgres:postgres@localhost/datacube

	- name: Setup tmate session
	uses: mxschmitt/action-tmate@v3
	- name: Run Tests
	shell: bash
	run: \|
	datacube system check

	echo "Running Tests"
	pytest --cov=. \
	--cov-report=html \
	--cov-report=xml:coverage.xml \
	--timeout=30 \
	libs apps

	env:
	AWS_DEFAULT_REGION: us-west-2
	DASK_TEMPORARY_DIRECTORY: /tmp/dask
	DATACUBE_DB_URL: postgresql://postgres:postgres@localhost/datacube

	- name: Upload Coverage
	if: \|
	github.repository == 'opendatacube/odc-tools'

	uses: codecov/codecov-action@v5
	with:
	fail_ci_if_error: false
	verbose: false

	test-wheels:
	runs-on: ubuntu-latest

	needs:
	- build-test-env-base
	- build-wheels

	services:
	# Label used to access the service container
	postgres:
	# Docker Hub image
	image: postgres
	# Provide the password for postgres
	env:
	POSTGRES_PASSWORD: postgres
	POSTGRES_DB: datacube
	# Set health checks to wait until postgres has started
	options: >-
	--health-cmd pg_isready
	--health-interval 10s
	--health-timeout 5s
	--health-retries 5
	ports:
	# Maps tcp port 5432 on service container to the host
	- 5432:5432
	steps:
	- uses: actions/checkout@v4

	- name: Get Wheels from Cache
	uses: actions/cache@v4
	id: wheels_cache
	with:
	path: ./wheels
	key: wheels-${{ github.sha }}

	- name: Get Conda Environment from Cache
	uses: actions/cache@v3
	id: conda_cache
	with:
	path: \|
	tests/env
	key: ${{ runner.os }}-test-env-${{ hashFiles('tests/test-env.yml') }}

	- name: Update PATH
	shell: bash
	run: \|
	echo "$(pwd)/tests/env/bin" >> $GITHUB_PATH

	- name: Install wheels for testing
	shell: bash
	run: \|
	which python
	which datacube

	ls -lh wheels/clean
	python -m pip install --no-deps wheels/clean/*whl
	python -m pip check \|\| true

	- name: Start Test DB
	shell: bash
	run: \|
	echo "Launching test db"
	datacube system init

	env:
	DATACUBE_DB_URL: postgresql://postgres:postgres@localhost/datacube

	- name: Run Tests
	shell: bash
	run: \|
	datacube system check
	datacube metadata add "https://raw.githubusercontent.com/GeoscienceAustralia/dea-config/master/product_metadata/eo3_sentinel_ard.odc-type.yaml"

	echo "Running Tests"
	pytest --timeout=30 libs apps

	env:
	AWS_DEFAULT_REGION: us-west-2
	DASK_TEMPORARY_DIRECTORY: /tmp/dask
	DATACUBE_DB_URL: postgresql://postgres:postgres@localhost/datacube

	publish-pypi:
	if: \|
	github.event_name == 'push'
	&& github.repository == 'opendatacube/odc-tools'
	&& (github.ref == 'refs/heads/stable' \|\| github.ref == 'refs/heads/pypi/publish')

	strategy:
	matrix:
	pkg:
	- odc-cloud
	- odc-io
	- odc-ui
	- odc-apps-cloud
	- odc-apps-dc-tools

	needs:
	- build-wheels
	- test-wheels

	runs-on: ubuntu-latest

	steps:
	- uses: actions/checkout@v4

	- name: Config
	if: \|
	github.event_name == 'push'
	&& github.repository == 'opendatacube/odc-tools'
	&& (github.ref == 'refs/heads/stable' \|\| github.ref == 'refs/heads/pypi/publish')
	id: cfg
	env:
	PKG: ${{ matrix.pkg }}
	run: \|
	tk="pypi_token_${PKG//-/_}"
	echo "tk=${tk}" >> $GITHUB_OUTPUT
	echo "publish=yes" >> $GITHUB_OUTPUT

	- name: Setup Python
	if: steps.cfg.outputs.publish == 'yes'
	uses: actions/setup-python@v1
	with:
	python-version: 3.8

	- name: Install Twine
	if: steps.cfg.outputs.publish == 'yes'
	run: \|
	python -m pip install --upgrade pip
	python -m pip install --upgrade setuptools
	python -m pip install --upgrade \
	toml \
	wheel \
	twine
	python -m pip freeze
	- uses: actions/cache@v4
	id: wheels_cache
	if: steps.cfg.outputs.publish == 'yes'
	with:
	path: ./wheels
	key: wheels-${{ github.sha }}

	- name: Prepare for upload
	if: steps.cfg.outputs.publish == 'yes'
	run: \|
	mkdir -p ./pips
	./scripts/mk-pip-tree.sh ./wheels/clean ./pips
	find ./pips -type f
	- name: Upload to PyPI
	if: steps.cfg.outputs.publish == 'yes'
	env:
	TWINE_PASSWORD: ${{ secrets[ steps.cfg.outputs.tk ] }}
	TWINE_USERNAME: __token__
	PKG: ${{ matrix.pkg }}

	run: \|
	ls pips/${PKG}
	twine upload --non-interactive --skip-existing pips/${PKG}/*

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Fix GHA: PG admin tools have moved #3895

Workflow file

Fix GHA: PG admin tools have moved #3895

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Workflow file for this run