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TASK-6765 - Improve VCF Export performance from secondary sample index #2503

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TASK-6765 - Improve VCF Export performance from secondary sample index #2503

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Commits on Sep 11, 2024

  1. storage: Add DataFields for INDELs and AltCoordinates #TASK-6765

    @j-coll
    j-coll committed Sep 11, 2024
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  2. storage: Add varint to store DataSchema entry length. #TASK-6765

    @j-coll
    j-coll committed Sep 11, 2024
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  3. storage: Skip data entries if equals to defaults. #TASK-6765

    @j-coll
    j-coll committed Sep 11, 2024
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  4. storage: Replace string with binary file data encoding. #TASK-6765

    @j-coll
    j-coll committed Sep 11, 2024
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  5. storage: Add sampleIndexConfiguration.fileDataConfiguration. #TASK-6765

    @j-coll
    j-coll committed Sep 11, 2024
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  6. storage: Fix junit tests. #TASK-6765

    @j-coll
    j-coll committed Sep 11, 2024
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  7. storage: Add VariantQueryParam "source" #TASK-6765

    @j-coll
    j-coll committed Sep 11, 2024
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  8. storage: Fix NPE building sample index. #TASK-6765

    @j-coll
    j-coll committed Sep 11, 2024
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  9. storage: Ensure SampleIndexConfiguration always exists. Add migration… 

    …. #TASK-6765
    @j-coll
    j-coll committed Sep 11, 2024
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  10. app: Fix migration EnsureSampleIndexConfigurationIsAlwaysDefined. #TA… 

    …SK-6765
    @j-coll
    j-coll committed Sep 11, 2024
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Commits on Sep 20, 2024

  1. Merge branch 'develop' into TASK-6765

    @j-coll
    j-coll committed Sep 20, 2024
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  2. storage: Fix compilation issues #TASK-6765

    @j-coll
    j-coll committed Sep 20, 2024
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Commits on Oct 18, 2024

  1. storage: Rename schema "entry" with "document". Create parent schema … 

    …class. #TASK-6765
    @j-coll
    j-coll committed Oct 18, 2024
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  2. storage: Rename IndexFieldConfiguration with FieldConfiguration #TASK… 

    …-6765
    @j-coll
    j-coll committed Oct 18, 2024
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  3. storage: Rename SampleVariantIndexEntry to SampleIndexVariant and Ann… 

    …otationIndexEntry to SampleIndexVariantAnnotation #TASK-6765
    @j-coll
    j-coll committed Oct 18, 2024
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  4. Merge branch 'develop' into TASK-6765

    @j-coll
    j-coll committed Oct 18, 2024
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  5. storage: Fix compilation issue. #TASK-6765

    @j-coll
    j-coll committed Oct 18, 2024
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  6. storage: Rename "canUseThisExecutor" with "acceptsQuery" #TASK-6765

    @j-coll
    j-coll committed Oct 18, 2024
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Commits on Nov 8, 2024

  1. Merge branch 'develop' into TASK-6765

    @j-coll
    j-coll committed Nov 8, 2024
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Commits on Nov 11, 2024

  1. Push echo to debug pull-request-approve #TASK-6765

    @juanfeSanahuja
    juanfeSanahuja committed Nov 11, 2024
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Commits on Nov 15, 2024

  1. storage: Fix tests. #TASK-6765

    @j-coll
    j-coll committed Nov 15, 2024
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  2. Merge branch 'TASK-6765' of github.com:opencb/opencga into TASK-6765

    @j-coll
    j-coll committed Nov 15, 2024
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Commits on Nov 27, 2024

  1. storage: Add missing --source arg. #TASK-6765

    @j-coll
    j-coll committed Nov 27, 2024
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