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16 changes: 8 additions & 8 deletions src/ontology/md/CEPH/02/CEPH_0000002.md
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## Class : cephalopod eye

* *IRI* = http://purl.obolibrary.org/obo/CEPH_0000002

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/9/98/Eye_squid.jpg/762px-Eye_squid.jpg)
![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/4/43/Octopusv_cropped.JPG/203px-Octopusv_cropped.JPG)
![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/9/9c/Nautilus_pompilius_%28head%29.jpg/240px-Nautilus_pompilius_%28head%29.jpg)
![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/0/03/Cuttlefish_eye_closeup.JPG/240px-Cuttlefish_eye_closeup.JPG)
![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/a/a0/Squid_eye.jpg/800px-Squid_eye.jpg)
* *Label* = cephalopod eye
* *Comment* = todo - reconcile with camera-type eye in uberon

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* [eye](../../UBERON/70/UBERON_0000970.md)

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/9/98/Eye_squid.jpg/762px-Eye_squid.jpg)
![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/4/43/Octopusv_cropped.JPG/203px-Octopusv_cropped.JPG)
![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/9/9c/Nautilus_pompilius_%28head%29.jpg/240px-Nautilus_pompilius_%28head%29.jpg)
![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/0/03/Cuttlefish_eye_closeup.JPG/240px-Cuttlefish_eye_closeup.JPG)
![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/a/a0/Squid_eye.jpg/800px-Squid_eye.jpg)

## Equivalencies


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8 changes: 4 additions & 4 deletions src/ontology/md/CEPH/15/CEPH_0000015.md
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## Class : arm

* *IRI* = http://purl.obolibrary.org/obo/CEPH_0000015

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/f/ff/Illex_illecebrosus_arm.jpg/440px-Illex_illecebrosus_arm.jpg)
* *Label* = arm
* *Definition* = One of the circumoral appendages of cephalopods. In decapodiforms each member of the fourth pair of arms is modified to form a tentacle. [ [database_cross_reference](../../ef/oboInOwl#hasDbXref.md) = http://tolweb.org/accessory/Cephalopoda_Glossary?acc_id=587 ]

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* [circumoral appendage](../../CEPH/08/CEPH_0000308.md)

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/f/ff/Illex_illecebrosus_arm.jpg/440px-Illex_illecebrosus_arm.jpg)

## Equivalencies


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8 changes: 4 additions & 4 deletions src/ontology/md/CEPH/23/CEPH_0000023.md
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## Class : beak

* *IRI* = http://purl.obolibrary.org/obo/CEPH_0000023

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/2/26/Architeuthis_beak.jpg/800px-Architeuthis_beak.jpg)
* *Label* = beak
* *Definition* = One of the two chitinous jaws of cephalopods. The dorsal beak is the "upper" beak and it inserts within the lower beak to tear tissue with a sissors-like cutting action. [ [database_cross_reference](../../ef/oboInOwl#hasDbXref.md) = http://tolweb.org/accessory/Cephalopod_Beak_Terminology?acc_id=1980 ]

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## Superclasses

* [organism subdivision](../../UBERON/75/UBERON_0000475.md)

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/2/26/Architeuthis_beak.jpg/800px-Architeuthis_beak.jpg)
* [has part](../../BFO/51/BFO_0000051.md) some [chitin](../../CEPH/59/CEPH_0000059.md)

## Equivalencies
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8 changes: 4 additions & 4 deletions src/ontology/md/CEPH/24/CEPH_0000124.md
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## Class : gladius

* *IRI* = http://purl.obolibrary.org/obo/CEPH_0000124

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/8/89/Sepioteuthis_lessoniana_gladius.jpg)
* *Label* = gladius
* *Definition* = The chitinous remnant of the shell in many decapodiforms and <strong>Vampyroteuthis</strong>. It is generally feather-shaped and lies in the dorsal mid-line of the body along the full length of the mantle. The gladius lies within the shell sac which secretes it. [ [database_cross_reference](../../ef/oboInOwl#hasDbXref.md) = http://tolweb.org/accessory/Cephalopod_Gladius_Terminology?acc_id=1955 ]
* *Comment* = The gladius, found in many decapodiforms and Vampyroteuthis, is an internal remnant of the originally external shell of cephalopods. Other cephalopods have other types of shell remnants. The gladius lies within a sac, the shell sac, which secretes it and to which various muscles attach. The gladius has a variety of shapes and thicknesses, is composed mostly of chitin and is located in the dorsal midline and generally extends the full length of the mantle. Conus field - The lateral portion of the gladius that is continuous posteriorly with the primary conus or its remnant and laterally with the edges of the vanes. The conus field is differentiated from the vanes by longitudinal lines and marked changes in the orientation of the growth lines. A conus field is generally lacking if the gladius lacks a primary conus.
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## Superclasses

* [organism subdivision](../../UBERON/75/UBERON_0000475.md)

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/8/89/Sepioteuthis_lessoniana_gladius.jpg)
* [has part](../../BFO/51/BFO_0000051.md) some [chitin](../../CEPH/59/CEPH_0000059.md)
* [homologous_to](../../CEPH/07/CEPH_0001007.md) some [shell](../../UBERON/12/UBERON_0006612.md)

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14 changes: 7 additions & 7 deletions src/ontology/md/CEPH/30/CEPH_0000130.md
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## Class : hectocotylus

* *IRI* = http://purl.obolibrary.org/obo/CEPH_0000130

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/f/fb/Hectocotylized_arm_of_an_octopod.jpg)
![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/9/99/Hectocotylized_arm_of_a_squid.jpg/613px-Hectocotylized_arm_of_a_squid.jpg)
![Depiction](http://upload.wikimedia.org/wikipedia/en/thumb/c/c9/Ocythoe_tuberculata_hectocotylus_-_from_Commons.jpg/220px-Ocythoe_tuberculata_hectocotylus_-_from_Commons.jpg)
![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/c/cf/Abraliopsis_morisi_hectocotylus-English.jpg/350px-Abraliopsis_morisi_hectocotylus-English.jpg)
* *Label* = hectocotylus
* *Definition* = The modified arm in males used for transferring spermatophores to the female. In incirrates the hectocotylus is one member of arm pair III while in decapodiforms frequently one or both members of arm pair IV are modified. Many species of coleoid cephalopods lack a hectocotylus. [ [database_cross_reference](../../ef/oboInOwl#hasDbXref.md) = Wikipedia:Hectocotylus, [database_cross_reference](../../ef/oboInOwl#hasDbXref.md) = http://tolweb.org/accessory/Cephalopoda_Glossary?acc_id=587 ]
* *Comment* = Taxon notes: Among Decapodiformes (ten-limbed cephalopods), generally either one or both of arms IV are hectocotylized; in incirrate octopuses it is one of arm pair III.[1] Many coleoids lack hectocotyli altogether.[1] The shape of the tip of the hectocotylus has been much used in octopod systematics. In many species it is considerably elaborated. However, in the males of some species, such as the Seven-arm Octopus (Haliphron atlanticus), the hectocotylus develops in an inconspicuous sac in front of the right eye that gives the male the appearance of having only seven arms
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* [arm](../../CEPH/15/CEPH_0000015.md)
* [intromittent organ](../../UBERON/11/UBERON_0008811.md)

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/f/fb/Hectocotylized_arm_of_an_octopod.jpg)
![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/9/99/Hectocotylized_arm_of_a_squid.jpg/613px-Hectocotylized_arm_of_a_squid.jpg)
![Depiction](http://upload.wikimedia.org/wikipedia/en/thumb/c/c9/Ocythoe_tuberculata_hectocotylus_-_from_Commons.jpg/220px-Ocythoe_tuberculata_hectocotylus_-_from_Commons.jpg)
![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/c/cf/Abraliopsis_morisi_hectocotylus-English.jpg/350px-Abraliopsis_morisi_hectocotylus-English.jpg)

## Equivalencies


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8 changes: 4 additions & 4 deletions src/ontology/md/CEPH/34/CEPH_0000134.md
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## Class : hook

* *IRI* = http://purl.obolibrary.org/obo/CEPH_0000134

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/e/e0/Tentacule_Abraliopsis_morisi.jpg/237px-Tentacule_Abraliopsis_morisi.jpg)
* *Label* = hook
* *Definition* = Horny structure that looks like a single claw and is derived from the inner sucker ring in some decapodiforms. Hooks may be found on the arms and/or tentacular clubs of squid. The relative advantage of hooks vs toothed rings is uncertain. [ [database_cross_reference](../../ef/oboInOwl#hasDbXref.md) = http://tolweb.org/accessory/Cephalopod_Hooks?acc_id=1983 ]
* *Comment* = ontogenically derived from suckers on arms and/or clubs of some oegopsids
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## Superclasses

* [anatomical structure](../../UBERON/61/UBERON_0000061.md)

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/e/e0/Tentacule_Abraliopsis_morisi.jpg/237px-Tentacule_Abraliopsis_morisi.jpg)
* [part of](../../BFO/50/BFO_0000050.md) some [circumoral appendage](../../CEPH/08/CEPH_0000308.md)
* [has part](../../BFO/51/BFO_0000051.md) some [chitin](../../CEPH/59/CEPH_0000059.md)

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## Class : ink sac

* *IRI* = http://purl.obolibrary.org/obo/CEPH_0000139

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/en/b/b5/Chtenopteryx_sicula2_-_from_Commons.jpg)
* *Label* = ink sac
* *Definition* = Organ composed of a gland that secretes ink, a sac that stores ink and a duct that connects it to the rectum. The ink sac generally appears black from the outside although it may be covered by silvery tissue in some species. [ [database_cross_reference](../../ef/oboInOwl#hasDbXref.md) = http://tolweb.org/accessory/Cephalopoda_Glossary?acc_id=587 ]

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## Superclasses

* [gland](../../UBERON/30/UBERON_0002530.md)

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/en/b/b5/Chtenopteryx_sicula2_-_from_Commons.jpg)
* [secretes](../../es/ceph#secretes.md) some [ink](../../CEPH/85/CEPH_0000285.md)

## Equivalencies
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## Class : sucker

* *IRI* = http://purl.obolibrary.org/obo/CEPH_0000248

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/0/04/Mastigoteuthis_grimaldii2.jpg)
![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/1/15/Cephalopod_suckers_and_configuration_of_suckers_%28schematic%29_on_tentacular_club.jpg/647px-Cephalopod_suckers_and_configuration_of_suckers_%28schematic%29_on_tentacular_club.jpg)
![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/b/b8/Suckers_of_octopus_by_steve_lodefink.jpg/180px-Suckers_of_octopus_by_steve_lodefink.jpg)
* *Label* = sucker
* *Definition* = Muscular suction-cup on the arms and tentacles and occasionally on the buccal supports. The sucker consists of a cup-shaped portion, the acetabulum, and a flat, distal ring, the infundibulum, that contacts the substrate. Suckers of decapodiforms contain horny rings that often bear teeth or sometimes form hooks. [ [database_cross_reference](../../ef/oboInOwl#hasDbXref.md) = http://tolweb.org/accessory/Cephalopoda_Glossary?acc_id=587 ]

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## Superclasses

* [surface structure](../../UBERON/02/UBERON_0003102.md)

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/0/04/Mastigoteuthis_grimaldii2.jpg)
![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/1/15/Cephalopod_suckers_and_configuration_of_suckers_%28schematic%29_on_tentacular_club.jpg/647px-Cephalopod_suckers_and_configuration_of_suckers_%28schematic%29_on_tentacular_club.jpg)
![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/b/b8/Suckers_of_octopus_by_steve_lodefink.jpg/180px-Suckers_of_octopus_by_steve_lodefink.jpg)
* [part of](../../BFO/50/BFO_0000050.md) some [collection of suckers](../../CEPH/05/CEPH_0000305.md)

## Equivalencies
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8 changes: 4 additions & 4 deletions src/ontology/md/CEPH/53/CEPH_0000153.md
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## Class : ligula

* *IRI* = http://purl.obolibrary.org/obo/CEPH_0000153

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/f/fb/Hectocotylized_arm_of_an_octopod.jpg)
* *Label* = ligula
* *Definition* = The portion of the sucker-free end-organ of the hectocotylus of many incirrate octopods that is generally elongate and longitudinally grooved. The ligula in octopodids is often spatulate in shape with transverse ridges. Spermatophores transferred along the sperm groove of the hectocotylus presumably enter the ligula which assists in their transfer to the female. Details of the use of the ligula are unknown. [ [database_cross_reference](../../ef/oboInOwl#hasDbXref.md) = http://tolweb.org/accessory/Cephalopoda_Glossary?acc_id=587 ]

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* [surface structure](../../UBERON/02/UBERON_0003102.md)
* [reproductive structure](../../UBERON/56/UBERON_0005156.md)
* [male anatomical structure](../../UBERON/03/UBERON_0014403.md)

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/f/fb/Hectocotylized_arm_of_an_octopod.jpg)
* [part of](../../BFO/50/BFO_0000050.md) some [end organ](../../CEPH/98/CEPH_0000098.md)

## Equivalencies
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## Class : tentacle

* *IRI* = http://purl.obolibrary.org/obo/CEPH_0000256

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/a/aa/Illex_illecebrosus_tentacle.jpg/440px-Illex_illecebrosus_tentacle.jpg)
* *Label* = tentacle
* *Definition* = Elongate 4th circumoral appendage of cuttlefish and squids used to capture prey. Divided into proximal stalk and distal club. [ [source](../../ce/source.md) = http://www.sil.si.edu/smithsoniancontributions/zoology/pdf_hi/sctz-0513.pdf ]
* *Comment* = Modified 4th pair of appendages in decapodiforms that are capable of considerable extension and contraction. Although the tentacles are derived evolutionarily from the 4th pair of arms, the term, "arms IV"; is reserved for the subsequent arm pair, the ventral arms, which are evolutionarily the 5th pair of arms. Each tentacle consist of a proximal stalk usually devoid of suckers, and a distal club armed with suckers and occasionally hooks. [ [database_cross_reference](../../ef/oboInOwl#hasDbXref.md) = Wikipedia:Cephalopod_limb, [database_cross_reference](../../ef/oboInOwl#hasDbXref.md) = http://tolweb.org/accessory/Composite_Squid?acc_id=1936 ]
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* [circumoral appendage](../../CEPH/08/CEPH_0000308.md)

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/a/aa/Illex_illecebrosus_tentacle.jpg/440px-Illex_illecebrosus_tentacle.jpg)

## Equivalencies


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## Class : cuttlebone

* *IRI* = http://purl.obolibrary.org/obo/CEPH_0000082

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/a/ab/Herklots_1859_I_2_Sepia_officinalis_-_schelp.jpg)
* *Label* = cuttlebone
* *Definition* = A calcareous oblong supporting part of the mantle of cuttlefishes [ [source](../../ce/source.md) = http://www.sil.si.edu/smithsoniancontributions/zoology/pdf_hi/sctz-0513.pdf ]
* *Comment* = Predominately calcareous internal shell of sepiids (cuttlefish). It is composed of many chambers and functions primarily as a buoyancy organ. The cuttlebone is homologous with the phragmocone of <strong>Spirula</strong>, <strong>Nautilus</strong> and many fossil cephalopods. [ [database_cross_reference](../../ef/oboInOwl#hasDbXref.md) = http://tolweb.org/accessory/Cephalopoda_Glossary?acc_id=587 ]
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## Superclasses

* [organism subdivision](../../UBERON/75/UBERON_0000475.md)

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/a/ab/Herklots_1859_I_2_Sepia_officinalis_-_schelp.jpg)
* [homologous_to](../../CEPH/07/CEPH_0001007.md) some [phragmacone](../../CEPH/08/CEPH_0001008.md)

## Equivalencies
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## Class : tentacular club

* *IRI* = http://purl.obolibrary.org/obo/CEPH_0000291

## Depictions

![Depiction](http://tolweb.org/tree/ToLimages/LeachiaClub.JPG)
![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/e/e0/Tentacule_Abraliopsis_morisi.jpg/237px-Tentacule_Abraliopsis_morisi.jpg)
* *Label* = tentacular club
* *Definition* = Terminal, usually expanded, grasping portion of tentacle that is armed with suckers or, in some groups, with suckers and hooks. [ [obo-source](../../ce/oboInOwl#source.md) = Terminal, usually expanded, grasping portion of tentacle that is armed with suckers or, in some groups, with suckers and hooks. ]

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## Superclasses

* [circumoral appendage segment](../../CEPH/07/CEPH_0000307.md)

## Depictions

![Depiction](http://tolweb.org/tree/ToLimages/LeachiaClub.JPG)
![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/e/e0/Tentacule_Abraliopsis_morisi.jpg/237px-Tentacule_Abraliopsis_morisi.jpg)
* [part of](../../BFO/50/BFO_0000050.md) some [tentacle](../../CEPH/56/CEPH_0000256.md)

## Equivalencies
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## Class : paralarval stage

* *IRI* = http://purl.obolibrary.org/obo/CEPH_0000194

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/en/a/a4/Chtenopteryx_sicula_paralarvae_-_from_Commons.jpg)
* *Label* = paralarval stage
* *Definition* = First free-living, cephalopod life-history stage that is found in the near-surface plankton and that differs in both morphology and vertical distribution from older juveniles. [ [database_cross_reference](../../ef/oboInOwl#hasDbXref.md) = http://tolweb.org/accessory/Cephalopoda_Glossary?acc_id=587 ]

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* [life cycle stage](../../UBERON/05/UBERON_0000105.md)

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/en/a/a4/Chtenopteryx_sicula_paralarvae_-_from_Commons.jpg)

## Equivalencies


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## Class : egg mass

* *IRI* = http://purl.obolibrary.org/obo/CEPH_0000096

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/3/33/SquidEggCases-MontereryAquarium-April2-07.png/800px-SquidEggCases-MontereryAquarium-April2-07.png)
* *Label* = egg mass
* *Definition* = A large number of eggs encapsulated in a gelatinous matrix or a large number of such structures that are attached together. The egg mass of an oceanic squid can be a large, fragile gelatinous ball carrying many thousands of eggs. In contrast, the egg mass of a neritic squid (loliginid) can be composed of very tough capsules each carrying several hundred eggs with many capsules attached together at their bases and to the substrate to form an egg mass. [ [database_cross_reference](../../ef/oboInOwl#hasDbXref.md) = http://tolweb.org/accessory/Cephalopoda_Glossary?acc_id=587 ]
* *Comment* = todo - mireot
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* [anatomical cluster](../../UBERON/77/UBERON_0000477.md)

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/3/33/SquidEggCases-MontereryAquarium-April2-07.png/800px-SquidEggCases-MontereryAquarium-April2-07.png)

## Equivalencies


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## Class : multi-cellular organism

* *IRI* = http://purl.obolibrary.org/obo/UBERON_0000468

## Depictions

![Depiction](http://tolweb.org/tree/ToLimages/GenSquidDraw.JPG)
* *Label* = multi-cellular organism
* *Definition* = Anatomical structure that is an individual member of a species and consists of more than one cell.

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* [anatomical structure](../../UBERON/61/UBERON_0000061.md)

## Depictions

![Depiction](http://tolweb.org/tree/ToLimages/GenSquidDraw.JPG)

## Equivalencies


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## Class : radula

* *IRI* = http://purl.obolibrary.org/obo/UBERON_0004289

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/b/b9/Illex_illecebrosus_teeth.jpg/671px-Illex_illecebrosus_teeth.jpg)
* *Label* = radula
* *Definition* = an anatomical structure found in mollusks and used for feeding. It is a minutely toothed, chitinous ribbon. It is typically used for scraping or cutting food before the food enters the esophagus. The radula is unique to the molluscs, and is found in all classes of mollusks except for the bivalves.

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* [organ](../../UBERON/62/UBERON_0000062.md)

## Depictions

![Depiction](http://upload.wikimedia.org/wikipedia/commons/thumb/b/b9/Illex_illecebrosus_teeth.jpg/671px-Illex_illecebrosus_teeth.jpg)

## Equivalencies


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