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NTs: main, accessor nidamental glands; NT: circumoral appendage bud
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cmungall committed Jan 13, 2016
1 parent 33cf1bb commit 231b871
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Showing 3 changed files with 171 additions and 112 deletions.
4 changes: 2 additions & 2 deletions src/ontology/Makefile
Original file line number Diff line number Diff line change
Expand Up @@ -8,8 +8,8 @@ RELEASE = $(OBO)/ceph/releases/`date +%Y-%m-%d`
#
# To make a release, type 'make release' in this directory

build: ceph.obo minidiff
release: ceph.obo diff
build: ceph.obo
release: ceph.obo

test: ceph.obo

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22 changes: 20 additions & 2 deletions src/ontology/ceph.obo
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@@ -1,5 +1,5 @@
format-version: 1.2
data-version: releases/2015-03-15
data-version: releases/2016-01-12
synonymtypedef: acronym "acronym" broad
synonymtypedef: anamorph "anamorph" related
synonymtypedef: blast_name "blast name" related
Expand Down Expand Up @@ -38,6 +38,12 @@ is_a: UBERON:0000061 ! anatomical structure
created_by: cjm
creation_date: 2011-01-30T08:15:10Z

[Term]
id: CEPH:0000001
name: accessory nidamental gland
def: "The basic structural unit is a tubule composed of a single layer of epithelial cells containing ordered arrays of rough endoplasmic reticulum and a lumenal surface covered with microvilli, cilia, and structural specialization presumed to be involved in secretion." [http://www.ncbi.nlm.nih.gov/pubmed/906013]
is_a: CEPH:0000175 ! nidamental gland

[Term]
id: CEPH:0000002
name: cephalopod eye
Expand All @@ -46,6 +52,11 @@ is_a: UBERON:0000970 ! eye
created_by: cjm
creation_date: 2011-01-30T08:21:37Z

[Term]
id: CEPH:0000003
name: circumoral appendage bud
is_a: UBERON:0005423 ! developing anatomical structure

[Term]
id: CEPH:0000004
name: accessory gland complex
Expand All @@ -67,6 +78,11 @@ name: adult stage
def: "A female that has mature eggs (these are frequently stored in the oviducts), or a male that has produced spermatophores (these are stored in Needham's sac)." [http://tolweb.org/accessory/Cephalopoda_Glossary?acc_id=587]
is_a: UBERON:0000105 ! life cycle stage

[Term]
id: CEPH:0000007
name: main nidamental gland
is_a: CEPH:0000175 ! nidamental gland

[Term]
id: CEPH:0000009
name: anal flap
Expand Down Expand Up @@ -1021,9 +1037,10 @@ relationship: part_of CEPH:0001037 ! renal sac
[Term]
id: CEPH:0000175
name: nidamental gland
def: "Large glandular structures found in decapodiforms and <strong>Nautilus</strong> that lie in and open directly into the mantle cavity. The glands are composed of numerous lamellae that are involved in secretion of egg cases or the jelly of egg masses." [http://tolweb.org/accessory/Cephalopoda_Glossary?acc_id=587]
def: "Large glandular structures found in decapodiforms and Nautilus that lie in and open directly into the mantle cavity. The glands are composed of numerous lamellae that are involved in secretion of egg cases or the jelly of egg masses." [http://tolweb.org/accessory/Cephalopoda_Glossary?acc_id=587]
is_a: UBERON:0002530 ! gland
relationship: RO:0001025 UBERON:0006580 ! located in mantle cavity
property_value: seeAlso Nidamental:gland

[Term]
id: CEPH:0000176
Expand Down Expand Up @@ -1820,6 +1837,7 @@ def: "Any of the numerous arms or tentacles that arise from the head and surroun
synonym: "arm crown" RELATED []
synonym: "head appendage" RELATED []
is_a: UBERON:0000026 ! appendage
relationship: RO:0002202 CEPH:0000003 ! develops from circumoral appendage bud

[Term]
id: CEPH:0000309
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